RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TVP23AA6NH52 213 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PRMT5O14744 637 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 MAGEB4O15481 346 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 CHP2O43745 196 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 ENSAO43768 121 aaKnown RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 ZMPSTE24O75844 475 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 CNIH1O95406 144 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 LDOC1O95751 146 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 FADS2O95864 444 aaKnown RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 IFNA21P01568 189 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 TLX1NBP0CAT3 122 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 COX4I1P13073 169 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 KCNE1P15382 129 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 CD36P16671 472 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 IVDP26440 423 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PFN2P35080 140 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 SSTR5P35346 364 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 HSPA9P38646 679 aaKnown RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 MAP2K4P45985 399 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 XKP51811 444 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 UCNP55089 124 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 CCL7P80098 99 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 IFITM2Q01629 132 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 SKP2Q13309 424 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 EIF4EBP2Q13542 120 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 MPPED2Q15777 294 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 VAMP3Q15836 100 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 ATP6V1FQ16864 119 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 ORMDL2Q53FV1 153 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 SPIN3Q5JUX0 258 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 NT5DC3Q86UY8 548 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PHF13Q86YI8 300 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 TRAPPC5Q8IUR0 188 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 WDFY1Q8IWB7 410 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 SLC30A8Q8IWU4 369 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 MKXQ8IYA7 352 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PXT1Q8NFP0 134 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 OR4K2Q8NGD2 314 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 OR10G4Q8NGN3 311 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 STOML3Q8TAV4 291 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PIGXQ8TBF5 258 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 ABHD3Q8WU67 409 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 RNF138Q8WVD3 245 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 TESCQ96BS2 214 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 DCPSQ96C86 337 aaKnown RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 RCN3Q96D15 328 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 CPNE2Q96FN4 548 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 PDXPQ96GD0 296 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 CENPNQ96H22 339 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 ZNF75AQ96N20 296 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 FOPNLQ96NB1 174 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 GPR21Q99679 349 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 ZNF426Q9BUY5 554 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PORCNQ9H237 461 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 LINC00597Q9H2U6 94 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 TMEM27Q9HBJ8 222 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 C6orf50Q9HD87 102 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 PLEKHJ1Q9NW61 149 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 WSB1Q9Y6I7 421 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 KIF15Q9NS87 1388 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 COL2A1P02458 1487 aaPredicted RBP2.44□□□□□ -2.02
CALD1-224ENST00000498254 ZNF518AQ6AHZ1 1483 aa2.44□□□□□ -2.02
CALD1-224ENST00000498254 NUP214P35658 2090 aaPredicted RBP2.43□□□□□ -2.02
CALD1-224ENST00000498254 LRP4O75096 1905 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 IGHV1-69DA0A0B4J2H0 117 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 IGHV5-51A0A0C4DH38 117 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 IGHV3-66A0A0C4DH42 116 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 IGKV1-8A0A0C4DH67 115 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 A0A0J9YXV3 536 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 TMEM213A2RRL7 107 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 C9orf170A2RU37 121 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 DISC1C4P0D8 188 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 C9J4A7 227 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 H0Y980 276 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 H0Y9J4 135 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 K7EN84 100 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 CXCR6O00574 342 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 AZIN1O14977 448 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 DLEU1O43261 78 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 TGOLN2O43493 480 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 ANGPTL7O43827 346 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 SLC25A14O95258 325 aaPredicted RBP2.43□□□□□ -2.02
CALD1-224ENST00000498254 VAPBO95292 243 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 CDK1P06493 297 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 DCNP07585 359 aaKnown RBP2.43□□□□□ -2.02
CALD1-224ENST00000498254 TACSTD2P09758 323 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 PSG2P11465 335 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 GZMHP20718 246 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 MYL9P24844 172 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 CD70P32970 193 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 MYCNOSP40205 109 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 PMELP40967 661 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 RPL5P46777 297 aaKnown RBP2.43□□□□□ -2.02
CALD1-224ENST00000498254 SRP9P49458 86 aaKnown RBP2.43□□□□□ -2.02
CALD1-224ENST00000498254 ACOT2P49753 483 aa2.43□□□□□ -2.02
CALD1-224ENST00000498254 UBE2E1P51965 193 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms