RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 GABRR1P24046 479 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 TNFSF10P50591 281 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 TMPRSS3P57727 454 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 CARD18P57730 90 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 ARG2P78540 354 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 OR8B8Q15620 311 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 LRTM2Q8N967 370 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 OR2M7Q8NG81 312 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 NPRL2Q8WTW4 380 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 PIGTQ969N2 578 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 BORCS8Q96FH0 119 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 GALNT14Q96FL9 552 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 SUCNR1Q9BXA5 334 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 BCO1Q9HAY6 547 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 ATPIF1Q9UII2 106 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 SLC7A11Q9UPY5 501 aa10.78□□□□□ -0.68
AFF3-215ENST00000498090 C5orf63A6NC05 138 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 ZNF705EA8MWA4 302 aaPredicted RBP10.77□□□□□ -0.69
AFF3-215ENST00000498090 PRSS44E7EML9 344 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 K7EM74 188 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 K7EPK0 472 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 DEDDO75618 318 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 KNG1P01042 644 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 RFPL3SP0C7P2 107 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 PI3P19957 117 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 PTGER4P35408 488 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 FUT6P51993 359 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 UCP3P55916 312 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 B3GALT5-AS1P59052 145 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 S100A10P60903 97 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 RBM39Q14498 530 aaKnown RBP10.77□□□□□ -0.69
AFF3-215ENST00000498090 TBR1Q16650 682 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 IAH1Q2TAA2 248 aaPredicted RBP10.77□□□□□ -0.69
AFF3-215ENST00000498090 SNAI3Q3KNW1 292 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 ATRAIDQ6UW56 229 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 C6orf201Q7Z4U5 140 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 TMEM200AQ86VY9 491 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 CMSS1Q9BQ75 279 aaKnown RBP10.77□□□□□ -0.69
AFF3-215ENST00000498090 FAM173AQ9BQD7 235 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 SYT3Q9BQG1 590 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
AFF3-215ENST00000498090 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
AFF3-215ENST00000498090 IGHV3-15A0A0B4J1V0 119 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ATP6V1G2-DDX39BF2Z307 99 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 XRCC2O43543 280 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 NRASP01111 189 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 SFTPBP07988 381 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 HOXB5P09067 269 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 HKR1P10072 659 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 RPL12P30050 165 aaKnown RBP10.76□□□□□ -0.69
AFF3-215ENST00000498090 RFC3P40938 356 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 MEOX1P50221 254 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 SULT1A2P50226 295 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 UCNP55089 124 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ZNF766Q5HY98 468 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ABLIM2Q6H8Q1 611 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 AAED1Q7RTV5 226 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 EXTL1Q92935 676 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 SRXN1Q9BYN0 137 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 PARP11Q9NR21 331 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 GSKIPQ9P0R6 139 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 KLF13Q9Y2Y9 288 aaPredicted RBP10.76□□□□□ -0.69
AFF3-215ENST00000498090 EML6Q6ZMW3 1958 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A10PA6NDY2 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A18PA6NE21 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A16PA6NEW6 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 MSGN1A6NI15 193 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A20PA6NIJ5 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A8PA6NJQ4 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A7PA6NKC0 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ZNF716A6NP11 495 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A22PA8MWA6 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A12PA8MX19 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A5PA8MXJ8 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A23PA8MXZ1 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 E5RGE8 158 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 F8W036 122 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 H7C2Y5 167 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 LCATP04180 440 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FCGR3AP08637 254 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 DBHP09172 617 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A15PP0C7V4 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A13PP0C7W8 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A14PP0C7W9 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM90A24PP0C7X0 464 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ZNF728P0DKX0 622 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 CD46P15529 392 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 CHATP28329 748 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 CAV2P51636 162 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 FAM3AP98173 230 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ABCA11PQ4W5N1 156 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 OSR2Q8N2R0 312 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 COMMD1Q8N668 190 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 OR2V1Q8NHB1 315 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 OR14L1PQ8NHC6 308 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 ROBO4Q8WZ75 1007 aa10.76□□□□□ -0.69
AFF3-215ENST00000498090 CPNE4Q96A23 557 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms