RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ARID1AO14497 2285 aa15.31■□□□□ 0.04
RGP1-202ENST00000496906 OR2AT4A6NND4 320 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 FSTL3O95633 263 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 APOA1P02647 267 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 PSG2P11465 335 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 DUSP1P28562 367 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 TMEM33P57088 247 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 BTG1P62324 171 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 ZMYND11Q15326 602 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 FAM189A2Q15884 450 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 CARTPTQ16568 116 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 STUMQ69YW2 141 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 LINC00596Q86U02 117 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 LRRC28Q86X40 367 aaPredicted RBP15.3■□□□□ 0.04
RGP1-202ENST00000496906 CMTM4Q8IZR5 234 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 FAM89BQ8N5H3 189 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 DEFB108BQ8NET1 73 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 RAB40AQ8WXH6 277 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 POM121Q96HA1 1249 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 ATG5Q9H1Y0 275 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 WIPI2Q9Y4P8 454 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 PEX16Q9Y5Y5 336 aa15.3■□□□□ 0.04
RGP1-202ENST00000496906 IGKV1D-17A0A075B6S4 117 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 TRAV38-1A0A0B4J264 116 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 METTL21EPA6NDL7 271 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A10PA6NDY2 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A18PA6NE21 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A16PA6NEW6 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A20PA6NIJ5 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A8PA6NJQ4 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A7PA6NKC0 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 RFPL4AA6NLU0 287 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A22PA8MWA6 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A12PA8MX19 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A5PA8MXJ8 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A23PA8MXZ1 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 RFPL4AL1F8VTS6 287 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 IGHV2-70P01814 119 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A15PP0C7V4 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A13PP0C7W8 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A14PP0C7W9 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FAM90A24PP0C7X0 464 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 ELK1P19419 428 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 GABRR1P24046 479 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 MPV17LQ2QL34 196 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 PEG10Q86TG7 708 aaKnown RBP15.29■□□□□ 0.04
RGP1-202ENST00000496906 LRRC75A-AS1Q8N1F1 130 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 OR5T2Q8NGG2 359 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 ANGPTL6Q8NI99 470 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 WDFY2Q96P53 400 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 ZNF581Q9P0T4 197 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 OR14J1Q9UGF5 321 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 ZNF222Q9UK12 451 aa15.29■□□□□ 0.04
RGP1-202ENST00000496906 FOXI3A8MTJ6 420 aaPredicted RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 RAB27BO00194 218 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 PPIHO43447 177 aaKnown RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 OR7C1O76099 320 aaPredicted RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 HAND1O96004 215 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 CEBPDP49716 269 aaPredicted RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 VEGFCP49767 419 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 PDLIM4P50479 330 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 IKZF1Q13422 519 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 PDCD1Q15116 288 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 MOGAT2Q3SYC2 334 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 SIGIRRQ6IA17 410 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 Q6P435 159 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 OR56B1Q8NGI3 324 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 OR6Q1Q8NGQ2 317 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 TIMD4Q96H15 378 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 SEBOXQ9HB31 216 aaPredicted RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 ADAM30Q9UKF2 790 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 ITPR2Q14571 2701 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 SOCS1O15524 211 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 GYPAP02724 150 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 TFF1P04155 84 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 CHRM2P08172 466 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 AMY2BP19961 511 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 GIFP27352 417 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 S100A5P33763 92 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 MDH2P40926 338 aaKnown RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 GPR6P46095 362 aaPredicted RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 PITPNBP48739 271 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 AVPI1Q5T686 147 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 CD177Q8N6Q3 437 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 RAB1CQ92928 201 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
RGP1-202ENST00000496906 IFT22Q9H7X7 185 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 GLS2Q9UI32 602 aa15.28■□□□□ 0.04
RGP1-202ENST00000496906 CSMD1Q96PZ7 3565 aa15.27■□□□□ 0.04
RGP1-202ENST00000496906 ANKRD17O75179 2603 aaKnown RBP15.27■□□□□ 0.04
RGP1-202ENST00000496906 FAM25AB3EWG3 89 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 FAM25CB3EWG5 89 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 FAM25GB3EWG6 89 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 SCGNO76038 276 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 OR2H2O95918 312 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 CSF3P09919 207 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 ZNF44P15621 663 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 CDK2P24941 298 aa15.27■□□□□ 0.03
RGP1-202ENST00000496906 PRDX2P32119 198 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms