RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 C17orf98A8MV24 154 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 ZFPL1O95159 310 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF728P0DKX0 622 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 BCL3P20749 454 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 EDDM3BP56851 147 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-213ENST00000496347 PDZK1IP1Q13113 114 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 LRRC75BQ2VPJ9 315 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 LPCAT4Q643R3 524 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 LHFPL3Q86UP9 236 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 FAM58AQ8N1B3 248 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF555Q8NEP9 628 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 OR10AC1Q8NH08 325 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-213ENST00000496347 CPNE2Q96FN4 548 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-213ENST00000496347 CITED1Q99966 193 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF649Q9BS31 505 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 RAB18Q9NP72 206 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
HDAC4-213ENST00000496347 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 TMEM82A0PJX8 343 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 H3BUX3 64 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 KDM4BO94953 1096 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 ALX3O95076 343 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 BAG2O95816 211 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 COX7A1P24310 79 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 PEX2P28328 305 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 GBX2P52951 348 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-213ENST00000496347 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 OR13C9Q8NGT0 318 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 OR13D1Q8NGV5 346 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 OR5AK2Q8NH90 309 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 ZCCHC4Q9H5U6 513 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
HDAC4-213ENST00000496347 AMBNQ9NP70 447 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 IL36RNQ9UBH0 155 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 PCDHGB5Q9Y5G0 923 aa12.79□□□□□ -0.36
HDAC4-213ENST00000496347 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 ODF3BA8MYP8 253 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 MGST3O14880 152 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 SULT1B1O43704 296 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 WBP4O75554 376 aaKnown RBP12.78□□□□□ -0.36
HDAC4-213ENST00000496347 TSPAN9O75954 239 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 CLPXO76031 633 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 PRKACAP17612 351 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 GABRR1P24046 479 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 NPBWR2P48146 333 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 BMXP51813 675 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 LGALS4P56470 323 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 PROK1P58294 105 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 GRK1Q15835 563 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF782Q6ZMW2 699 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-213ENST00000496347 Q6ZSV7 163 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 OR5D14Q8NGL3 314 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 TSEN15Q8WW01 171 aaKnown RBP12.78□□□□□ -0.36
HDAC4-213ENST00000496347 SSX3Q99909 188 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 HMG20AQ9NP66 347 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 DHDHQ9UQ10 334 aa12.78□□□□□ -0.36
HDAC4-213ENST00000496347 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
HDAC4-213ENST00000496347 PSPNO60542 156 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 INMTO95050 263 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 HCKP08631 526 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 LIMS3P0CW19 117 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 LIMS4P0CW20 117 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 IGHV1-8P0DP01 117 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 DCKP27707 260 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 ERP29P30040 261 aaKnown RBP12.77□□□□□ -0.37
HDAC4-213ENST00000496347 OR3A1P47881 315 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 P2RX3P56373 397 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 CCDC58Q4VC31 144 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 ZNF626Q68DY1 528 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 TREML4Q6UXN2 200 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 SERPINA12Q8IW75 414 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 CHST4Q8NCG5 386 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 SETD9Q8NE22 299 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 RFT1Q96AA3 541 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 PDCD1LG2Q9BQ51 273 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 CHST6Q9GZX3 395 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-213ENST00000496347 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms