RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TRIP13Q15645 432 aaPredicted RBP2.97□□□□□ -1.93
SSR3-208ENST00000496050 TTMPQ5BVD1 217 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 ZFAND6Q6FIF0 208 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 LINC00596Q86U02 117 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 ZNF555Q8NEP9 628 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 OR4K17Q8NGC6 315 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 OR2Y1Q8NGV0 311 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 ZNF75AQ96N20 296 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 YPEL4Q96NS1 127 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 CATSPER2Q96P56 530 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 DHX35Q9H5Z1 703 aaKnown RBP2.97□□□□□ -1.93
SSR3-208ENST00000496050 METTL8Q9H825 291 aaKnown RBP2.97□□□□□ -1.93
SSR3-208ENST00000496050 OR2S2Q9NQN1 319 aa2.97□□□□□ -1.93
SSR3-208ENST00000496050 TMEM131Q92545 1883 aa2.96□□□□□ -1.93
SSR3-208ENST00000496050 NOS1P29475 1434 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 GOLGA8QA0A0J9YX86 632 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 IZUMO1RA6ND01 250 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 CLDN34H7C241 214 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 UBDO15205 165 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 NEMFO60524 1076 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 PFN1P07737 140 aaKnown RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 TEAD1P28347 426 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 IL12BP29460 328 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 SLC6A1P30531 599 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 TGFBR1P36897 503 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 RGS19P49795 217 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 FLI1Q01543 452 aaPredicted RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 TMEM69Q5SWH9 247 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 FA2HQ7L5A8 372 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 LRRC6Q86X45 466 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 SPICQ8N5J4 248 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 ZNF680Q8NEM1 530 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 OR6K3Q8NGY3 331 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 ITLN2Q8WWU7 325 aaPredicted RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 ZBED3Q96IU2 234 aaPredicted RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 PPP1R36Q96LQ0 422 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 PITX2Q99697 317 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 SEC22CQ9BRL7 303 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 MAT2BQ9NZL9 334 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 DHCR7Q9UBM7 475 aaKnown RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 CYB5R1Q9UHQ9 305 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 MRM2Q9UI43 246 aaKnown RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 SLC22A14Q9Y267 594 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 USH1CQ9Y6N9 552 aa2.96□□□□□ -1.94
SSR3-208ENST00000496050 RPRD2Q5VT52 1461 aaKnown RBP2.96□□□□□ -1.94
SSR3-208ENST00000496050 RBFOX3A6NFN3 312 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 ERICH4A6NGS2 130 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.95□□□□□ -1.94
SSR3-208ENST00000496050 CRXO43186 299 aaPredicted RBP2.95□□□□□ -1.94
SSR3-208ENST00000496050 KCNK2O95069 426 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 FADS2O95864 444 aaKnown RBP2.95□□□□□ -1.94
SSR3-208ENST00000496050 SCGB1C2P0DMR2 95 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 CASQ1P31415 396 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 GTF2H1P32780 548 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 MAGEA3P43357 314 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 TTPAP49638 278 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 ACOT2P49753 483 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 TRAM1Q15629 374 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 Q499Y3 187 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 ACTBL2Q562R1 376 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 SYCE1Q8N0S2 351 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 ACBD4Q8NC06 268 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 OR1P1Q8NH06 330 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 SCGB1C1Q8TD33 95 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 ZMYND19Q96E35 227 aaPredicted RBP2.95□□□□□ -1.94
SSR3-208ENST00000496050 APOL4Q9BPW4 351 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 TMEM38BQ9NVV0 291 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 POFUT2Q9Y2G5 429 aa2.95□□□□□ -1.94
SSR3-208ENST00000496050 GPR179Q6PRD1 2367 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 PGPA6NDG6 321 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 GYG2O15488 501 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 CD5P06127 495 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 PRTN3P24158 256 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 PSMB9P28065 219 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 GCLMP48507 274 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 RPS11P62280 158 aaKnown RBP eCLIP2.94□□□□□ -1.94
SSR3-208ENST00000496050 BSXQ3C1V8 233 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 ZNF773Q6PK81 442 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 FAM131AQ6UXB0 335 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 Q6ZT83 130 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 COPS6Q7L5N1 327 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
SSR3-208ENST00000496050 FMC1Q96HJ9 113 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 FAM60AQ9NP50 221 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 TREM1Q9NP99 234 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 IFT46Q9NQC8 304 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 C14orf166Q9Y224 244 aaKnown RBP2.94□□□□□ -1.94
SSR3-208ENST00000496050 SVILO95425 2214 aa2.94□□□□□ -1.94
SSR3-208ENST00000496050 USP42Q9H9J4 1324 aaKnown RBP2.93□□□□□ -1.94
SSR3-208ENST00000496050 ERICH2A1L162 156 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 RNASEK-C17orf49H0YIS7 233 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 M0QX08 132 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 MYO1DO94832 1006 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 KRTAP10-8P60410 259 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 CD164Q04900 197 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 PRKCDQ05655 676 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 ANGPT1Q15389 498 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 CLEC18BQ6UXF7 455 aa2.93□□□□□ -1.94
SSR3-208ENST00000496050 AHSA2Q719I0 299 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms