RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 SRRM5B3KS81 715 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 CTDSP2O14595 271 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 HPXP02790 462 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 ELK1P19419 428 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 EFNA4P52798 201 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 GMFBP60983 142 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 ERVK11-1P61568 191 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 IL13RA2Q14627 380 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 MPV17LQ2QL34 196 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 TMEM69Q5SWH9 247 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 PEG10Q86TG7 708 aaKnown RBP12.62□□□□□ -0.39
GAPDH-210ENST00000496049 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 TMEM104Q8NE00 496 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 S100ZQ8WXG8 99 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 BARX1Q9HBU1 254 aaPredicted RBP12.62□□□□□ -0.39
GAPDH-210ENST00000496049 HMG20AQ9NP66 347 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 ST3GAL6Q9Y274 331 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 PLEKHA6Q9Y2H5 1048 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 ROS1P08922 2347 aa12.62□□□□□ -0.39
GAPDH-210ENST00000496049 A0A1W2PP11 408 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 RNF212BA8MTL3 300 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CLDN25C9JDP6 229 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 OVOL3O00110 214 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CYB5R3P00387 301 aaPredicted RBP12.61□□□□□ -0.39
GAPDH-210ENST00000496049 KNG1P01042 644 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CHRM2P08172 466 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 DAOP14920 347 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 GABRR1P24046 479 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 NR4A2P43354 598 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 PITPNBP48739 271 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 EFNB2P52799 333 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 IKZF1Q13422 519 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 KCNJ8Q15842 424 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 SPRNQ5BIV9 151 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CNIH2Q6PI25 160 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 ACP7Q6ZNF0 438 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 Q8NFD4 153 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 C15orf40Q8WUR7 153 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 TIMD4Q96H15 378 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 Q96M66 194 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 GAL3ST1Q99999 423 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 NUDT16L1Q9BRJ7 211 aaKnown RBP12.61□□□□□ -0.39
GAPDH-210ENST00000496049 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 LPAR5Q9H1C0 372 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 SPACA1Q9HBV2 294 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 DSCAMO60469 2012 aa12.61□□□□□ -0.39
GAPDH-210ENST00000496049 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
GAPDH-210ENST00000496049 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 TMEM178BH3BS89 294 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 LY6G6DO95868 133 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 MUC1P15941 1255 aaPredicted RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 TNFSF8P32971 234 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 PMELP40967 661 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 SNU13P55769 128 aaKnown RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 MICBQ29980 383 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
GAPDH-210ENST00000496049 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 DYSFO75923 2080 aa12.6□□□□□ -0.39
GAPDH-210ENST00000496049 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 FABP12A6NFH5 140 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 F8VVB4 439 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 F8VWA3 439 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 SH2D1BO14796 132 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
GAPDH-210ENST00000496049 TPPPO94811 219 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 LHBP01229 141 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 EGR1P18146 543 aa12.59□□□□□ -0.39
GAPDH-210ENST00000496049 CDK2P24941 298 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms