RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RERGLQ9H628 205 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 S100A14Q9HCY8 104 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ISYNA1Q9NPH2 558 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 AIG1Q9NVV5 245 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 TAS2R1Q9NYW7 299 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 KIAA1456Q9P272 454 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 FAM230AA0A1W2PPH8 454 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 TYROBPO43914 113 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR2F2O95006 317 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 TNFAIP8O95379 198 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 S100A9P06702 114 aaKnown RBP7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 HOXB5P09067 269 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 SPNP16150 400 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 CCL3L1P16619 93 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 RBM34P42696 430 aaKnown RBP7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 POU3F4P49335 361 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 ARHGDIBP52566 201 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 TRAP1Q12931 704 aaKnown RBP7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 IFI44LQ53G44 452 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 LDLRAD2Q5SZI1 272 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 MINOS1Q5TGZ0 78 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 C1orf146Q5VVC0 180 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 FAM90A2PQ658T7 463 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 WDR86Q86TI4 376 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 ERI1Q8IV48 349 aaKnown RBP7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 ZNRF1Q8ND25 227 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR2AE1Q8NHA4 323 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 LIPHQ8WWY8 451 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 ST6GALNAC6Q969X2 333 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 WDR55Q9H6Y2 383 aaPredicted RBP7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 NLKQ9UBE8 527 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 RAB26Q9ULW5 256 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 MINOS1-NBL1R4GNA1 71 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 VPS13DQ5THJ4 4388 aa7.52□□□□□ -1.21
SMARCAL1-213ENST00000496037 C13orf42A0A1B0GVH6 325 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR2AT4A6NND4 320 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 H3BNX3 289 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 KHDRBS3O75525 346 aaKnown RBP7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 IGHV1-8P0DP01 117 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 S100A1P23297 94 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 CD24P25063 80 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 CNTFRP26992 372 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 PPIFP30405 207 aaKnown RBP7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 BRS3P32247 399 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 TPTEP56180 551 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 ZNF92Q03936 586 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 KIR2DS1Q14954 304 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 OGFOD2Q6N063 350 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 TMPRSS11FQ6ZWK6 438 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 ARPINQ7Z6K5 226 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 SGPP2Q8IWX5 399 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 ZNF781Q8N8C0 355 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR11H6Q8NGC7 330 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR10Z1Q8NGY1 313 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 TMEM255BQ8WV15 326 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 TMEM239Q8WW34 195 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 NOL4LQ96MY1 436 aaPredicted RBP7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 CGREF1Q99674 301 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 PITX2Q99697 317 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 PRSS27Q9BQR3 290 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 RANGRFQ9HD47 186 aaPredicted RBP7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 MRPS7Q9Y2R9 242 aaKnown RBP7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 MED31Q9Y3C7 131 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 LHFPL6Q9Y693 200 aa7.51□□□□□ -1.21
SMARCAL1-213ENST00000496037 PRSS37A4D1T9 235 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 CCDC160A6NGH7 325 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 SERPINE3A8MV23 424 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 F8WDY8 70 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 H0Y8G0 127 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 SLC16A7O60669 478 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 SAP30O75446 220 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 TMEM225BP0DP42 221 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 CENPAP49450 140 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 HIST1H3AP68431 136 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 RELQ04864 619 aaPredicted RBP7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 APOFQ13790 326 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 KRTAP27-1Q3LI81 207 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 KCTD21Q4G0X4 260 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 HIST2H3PS2Q5TEC6 136 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 TEX38Q6PEX7 206 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 CORO6Q6QEF8 472 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 HIST2H3AQ71DI3 136 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 NAA40Q86UY6 237 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 LYPD6Q86Y78 171 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 RBM45Q8IUH3 476 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 EME1Q96AY2 570 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 TPD52L3Q96J77 140 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 ST6GALNAC5Q9BVH7 336 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 GORASP2Q9H8Y8 452 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 GPN1Q9HCN4 374 aaPredicted RBP7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 MRPS18AQ9NVS2 196 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 SLAMF8Q9P0V8 285 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 N6AMT1Q9Y5N5 214 aa7.5□□□□□ -1.21
SMARCAL1-213ENST00000496037 A0A0G2JND7 137 aa7.49□□□□□ -1.21
SMARCAL1-213ENST00000496037 NPIPB5A8MRT5 1133 aa7.49□□□□□ -1.21
SMARCAL1-213ENST00000496037 B5MCH6 92 aa7.49□□□□□ -1.21
SMARCAL1-213ENST00000496037 H3BSH0 61 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms