RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 Q6ZSV7 163 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 OR13C3Q8NGS6 347 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 PPP1R35Q8TAP8 253 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 SSX3Q99909 188 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 ZNF649Q9BS31 505 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 AASSQ9UDR5 926 aa19.72■□□□□ 0.75
HLA-C-209ENST00000495835 hADV38S2A0JD32 116 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 TMEM212A6NML5 194 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 HAND1O96004 215 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 CCDC159P0C7I6 412 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 PROK1P58294 105 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 ZSCAN26Q16670 478 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 SAXO1Q8IYX7 474 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 DTX3Q8N9I9 347 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 ZNF555Q8NEP9 628 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 OR5D14Q8NGL3 314 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 OR13D1Q8NGV5 346 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 JAM3Q9BX67 310 aa19.71■□□□□ 0.75
HLA-C-209ENST00000495835 FAM90A8PA6NJQ4 464 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 ERP29P30040 261 aaKnown RBP19.7■□□□□ 0.74
HLA-C-209ENST00000495835 NPBWR2P48146 333 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 POU3F4P49335 361 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 GBX2P52951 348 aaPredicted RBP19.7■□□□□ 0.74
HLA-C-209ENST00000495835 EDDM3BP56851 147 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 LRRC75BQ2VPJ9 315 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 BRICD5Q6PL45 260 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 TREML4Q6UXN2 200 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 LIAT1Q6ZQX7 453 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 SERPINA12Q8IW75 414 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 PARP16Q8N5Y8 322 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 OR51A4Q8NGJ6 313 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 STMN2Q93045 179 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 COMMD4Q9H0A8 199 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 ZCCHC4Q9H5U6 513 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 ISG20L2Q9H9L3 353 aaKnown RBP19.7■□□□□ 0.74
HLA-C-209ENST00000495835 HMG20AQ9NP66 347 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 AMBNQ9NP70 447 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 RAB18Q9NP72 206 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 C8orf4Q9NR00 106 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 SMPD3Q9NY59 655 aaPredicted RBP19.7■□□□□ 0.74
HLA-C-209ENST00000495835 TBL2Q9Y4P3 447 aaKnown RBP19.7■□□□□ 0.74
HLA-C-209ENST00000495835 PCDHGB5Q9Y5G0 923 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 LINC00312Q9Y6C7 94 aa19.7■□□□□ 0.74
HLA-C-209ENST00000495835 TMEM82A0PJX8 343 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 H3BUX3 64 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 MGST3O14880 152 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 TIMM23O14925 209 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 INMTO95050 263 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 BCL3P20749 454 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 OR11H6Q8NGC7 330 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 OR52I1Q8NGK6 324 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 OR10AC1Q8NH08 325 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 OR5AK2Q8NH90 309 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 ZNF714Q96N38 554 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 FGF20Q9NP95 211 aaPredicted RBP19.69■□□□□ 0.74
HLA-C-209ENST00000495835 RBFOX1Q9NWB1 397 aaKnown RBP19.69■□□□□ 0.74
HLA-C-209ENST00000495835 FBLN5Q9UBX5 448 aa19.69■□□□□ 0.74
HLA-C-209ENST00000495835 SH2D1BO14796 132 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 KDM4BO94953 1096 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 ZFPL1O95159 310 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 BAG2O95816 211 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 PIPP12273 146 aaPredicted RBP19.68■□□□□ 0.74
HLA-C-209ENST00000495835 PRKACAP17612 351 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 OR13C9Q8NGT0 318 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 APH1BQ8WW43 257 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 FOXRED1Q96CU9 486 aaPredicted RBP19.68■□□□□ 0.74
HLA-C-209ENST00000495835 MALSU1Q96EH3 234 aa19.68■□□□□ 0.74
HLA-C-209ENST00000495835 IRGMA1A4Y4 181 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 VGLL3A8MV65 326 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 IGHV1-8P0DP01 117 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 GABRR1P24046 479 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 LMO1P25800 156 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 GRK1Q15835 563 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 CCDC58Q4VC31 144 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 C11orf88Q6PI97 169 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 OR52N4Q8NGI2 321 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 C17orf50Q8WW18 174 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 CPNE2Q96FN4 548 aaPredicted RBP19.67■□□□□ 0.74
HLA-C-209ENST00000495835 CDCA4Q9BXL8 241 aa19.67■□□□□ 0.74
HLA-C-209ENST00000495835 FUOMA2VDF0 154 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 ODF3BA8MYP8 253 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 SULT1B1O43704 296 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 PSPNO60542 156 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 COX7A1P24310 79 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 DCKP27707 260 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 BMXP51813 675 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 ZNF626Q68DY1 528 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 CRIP3Q6Q6R5 217 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 ZNF782Q6ZMW2 699 aaPredicted RBP19.66■□□□□ 0.74
HLA-C-209ENST00000495835 PPA2Q9H2U2 334 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 RANBP3Q9H6Z4 567 aaPredicted RBP19.66■□□□□ 0.74
HLA-C-209ENST00000495835 EXOSC4Q9NPD3 245 aaKnown RBP19.66■□□□□ 0.74
HLA-C-209ENST00000495835 IL36RNQ9UBH0 155 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 DHDHQ9UQ10 334 aa19.66■□□□□ 0.74
HLA-C-209ENST00000495835 UBE2J1Q9Y385 318 aaPredicted RBP19.66■□□□□ 0.74
HLA-C-209ENST00000495835 MEGF8Q7Z7M0 2845 aa19.65■□□□□ 0.74
HLA-C-209ENST00000495835 M0QZ24 198 aa19.65■□□□□ 0.74
HLA-C-209ENST00000495835 WBP4O75554 376 aaKnown RBP19.65■□□□□ 0.74
HLA-C-209ENST00000495835 KIR2DS4P43632 304 aa19.65■□□□□ 0.74
HLA-C-209ENST00000495835 TTC23Q5W5X9 447 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms