RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ASCL5Q7RTU5 278 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 P4HA3Q7Z4N8 544 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 FAM169BQ8N8A8 192 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 SLC30A7Q8NEW0 376 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 OR2J1Q9GZK6 312 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 CLCF1Q9UBD9 225 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 ZNF107Q9UII5 783 aaPredicted RBP8.9□□□□□ -0.98
SAMM50-206ENST00000494795 RLN2P04090 185 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 HOXB5P09067 269 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 PGAM2P15259 253 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 ZNF250P15622 560 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 MPZP25189 248 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 KIR2DL2P43627 348 aaPredicted RBP8.9□□□□□ -0.98
SAMM50-206ENST00000494795 RBM11P57052 281 aaKnown RBP8.9□□□□□ -0.98
SAMM50-206ENST00000494795 SLC22A25Q6T423 547 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 SEM1Q6ZVN7 128 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 ZDHHC22Q8N966 263 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 C10orf35Q96D05 121 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 RRNAD1Q96FB5 475 aaKnown RBP8.9□□□□□ -0.98
SAMM50-206ENST00000494795 MFFQ9GZY8 342 aa8.9□□□□□ -0.98
SAMM50-206ENST00000494795 RNF222A6NCQ9 220 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 C5orf51A6NDU8 294 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 SIGLEC5O15389 551 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 MPGP29372 298 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 ZNF585AQ6P3V2 769 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 ZNF767PQ75MW2 155 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 ZNF546Q86UE3 836 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 TMEM200AQ86VY9 491 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 CXorf67Q86X51 503 aaPredicted RBP8.9□□□□□ -0.99
SAMM50-206ENST00000494795 FOXRED2Q8IWF2 684 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 COQ8AQ8NI60 647 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 DKK4Q9UBT3 224 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 GHRLQ9UBU3 117 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 ANXA10Q9UJ72 324 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 SLC7A11Q9UPY5 501 aa8.9□□□□□ -0.99
SAMM50-206ENST00000494795 HEATR1Q9H583 2144 aaKnown RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 DBX1A6NMT0 343 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 SERPINE3A8MV23 424 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 PRR33A8MZF0 331 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 SCO1O75880 301 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 OR5H8P0DN80 308 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 S100A11P31949 105 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 PHLDA2Q53GA4 152 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 PEG10Q86TG7 708 aaKnown RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 OPN3Q9H1Y3 402 aaPredicted RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.89□□□□□ -0.994e-15■■■■■ 31.4
SAMM50-206ENST00000494795 MBD2Q9UBB5 411 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 COL12A1Q99715 3063 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 RFPL4AA6NLU0 287 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 RFPL4AL1F8VTS6 287 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 HS3ST1O14792 307 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 SCGNO76038 276 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 ZNF14P17017 642 aaPredicted RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 TMEM128Q5BJH2 165 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 FAM53AQ6NSI3 398 aaPredicted RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 APOBEC3DQ96AK3 386 aaPredicted RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 ZNF442Q9H7R0 627 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 GP6Q9HCN6 339 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 NBASA2RRP1 2371 aa8.89□□□□□ -0.99
SAMM50-206ENST00000494795 DIDO1Q9BTC0 2240 aaKnown RBP8.89□□□□□ -0.99
SAMM50-206ENST00000494795 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 MPV17P39210 176 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 NRN1LQ496H8 165 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CLEC9AQ6UXN8 241 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 PHB2Q99623 299 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 LRFN3Q9BTN0 628 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 RNF126Q9BV68 326 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CLEC4MQ9H2X3 399 aaPredicted RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 RGCCQ9H4X1 137 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 MYOZ1Q9NP98 299 aaPredicted RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 OR5AC2Q9NZP5 309 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CACNA1DQ01668 2161 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 TLN1Q9Y490 2541 aaKnown RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 ZSCAN5BA6NJL1 495 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 KLK10O43240 276 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 SCTP09683 121 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 PRKACAP17612 351 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CEBPDP49716 269 aaPredicted RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 NHLRC3Q5JS37 347 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 IGFL2Q6UWQ7 119 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 UNQ6126/PRO20091Q6UXV3 157 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 ZDHHC23Q8IYP9 409 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 ARRDC1Q8N5I2 433 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 BOLLQ8N9W6 283 aaKnown RBP8.88□□□□□ -0.99
SAMM50-206ENST00000494795 RDH5Q92781 318 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 ATRXP46100 2492 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 SFT2D2O95562 160 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CD8AP01732 235 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 IGHG3P01860 377 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CALCRP30988 508 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 APLNRP35414 380 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 CEACAM21Q3KPI0 293 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 C11orf87Q6NUJ2 197 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 C22orf34Q6ZV56 151 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 LDLRAD3Q86YD5 345 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 GSKIPQ9P0R6 139 aa8.88□□□□□ -0.99
SAMM50-206ENST00000494795 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
SAMM50-206ENST00000494795 FPR2P25090 351 aa8.87□□□□□ -0.99
SAMM50-206ENST00000494795 FCGR2CP31995 323 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms