RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MEX3AA1L020 520 aaKnown RBP27.09■■□□□ 1.93
CBX4-203ENST00000494546 NDUFA7O95182 113 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 PRKACAP17612 351 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 PEX2P28328 305 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 RPL15P61313 204 aaKnown RBP27.09■■□□□ 1.93
CBX4-203ENST00000494546 EDDM3AQ14507 147 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 RNF144BQ7Z419 303 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 OR8H2Q8N162 312 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 OR5D18Q8NGL1 313 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 TSEN15Q8WW01 171 aaKnown RBP27.09■■□□□ 1.93
CBX4-203ENST00000494546 C17orf50Q8WW18 174 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 SNX22Q96L94 193 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 DHDHQ9UQ10 334 aa27.09■■□□□ 1.93
CBX4-203ENST00000494546 MT-ND2P03891 347 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 RPSAP08865 295 aaKnown RBP27.08■■□□□ 1.93
CBX4-203ENST00000494546 GABRR1P24046 479 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 COX7A1P24310 79 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 GTF2A1P52655 376 aaPredicted RBP27.08■■□□□ 1.93
CBX4-203ENST00000494546 MIDNQ504T8 468 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 TTC23Q5W5X9 447 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 ZNF782Q6ZMW2 699 aaPredicted RBP27.08■■□□□ 1.93
CBX4-203ENST00000494546 NEK6Q9HC98 313 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 C8orf4Q9NR00 106 aa27.08■■□□□ 1.93
CBX4-203ENST00000494546 A0A1B0GUS0 222 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 GDPGP1Q6ZNW5 385 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 C17orf107Q6ZR85 190 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 SERPINA12Q8IW75 414 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 PACRGLQ8N7B6 248 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 HAVCR2Q8TDQ0 301 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 JAM3Q9BX67 310 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 CHST6Q9GZX3 395 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 GLS2Q9UI32 602 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 VPREB3Q9UKI3 123 aa27.07■■□□□ 1.92
CBX4-203ENST00000494546 IGKV1-12A0A0C4DH73 117 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 IGKV1D-12P01611 117 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 HCKP08631 526 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 DCKP27707 260 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 ETV1P50549 477 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 GRK1Q15835 563 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 BEND2Q8NDZ0 799 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 OR52N4Q8NGI2 321 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 OR5D14Q8NGL3 314 aa27.06■■□□□ 1.92
CBX4-203ENST00000494546 SEBOXQ9HB31 216 aaPredicted RBP27.06■■□□□ 1.92
CBX4-203ENST00000494546 DLX6P56179 175 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 SPIN3Q5JUX0 258 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 DHRSXQ8N5I4 330 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 ZSCAN4Q8NAM6 433 aaPredicted RBP27.05■■□□□ 1.92
CBX4-203ENST00000494546 SLITRK2Q9H156 845 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 HMG20AQ9NP66 347 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 GSTK1Q9Y2Q3 226 aa27.05■■□□□ 1.92
CBX4-203ENST00000494546 IRGMA1A4Y4 181 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 C17orf98A8MV24 154 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 SULT1B1O43704 296 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 ZNF728P0DKX0 622 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 BMXP51813 675 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 ZNF146Q15072 292 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 OR2G6Q5TZ20 316 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 OLFML2AQ68BL7 652 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 TMPRSS11AQ6ZMR5 421 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 PARP16Q8N5Y8 322 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 TPRX1Q8N7U7 411 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 SETD9Q8NE22 299 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 OR5R1Q8NH85 324 aa27.04■■□□□ 1.92
CBX4-203ENST00000494546 CLPSL1A2RUU4 121 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 PSPNO60542 156 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 KDM4BO94953 1096 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 SOX2P48431 317 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 LGALS4P56470 323 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 XAF1Q6GPH4 301 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 DHRS7BQ6IAN0 325 aaPredicted RBP27.03■■□□□ 1.92
CBX4-203ENST00000494546 AJUBAQ96IF1 538 aa27.03■■□□□ 1.92
CBX4-203ENST00000494546 hADV38S2A0JD32 116 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 ANKRD65E5RJM6 399 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 SIRPB1O00241 398 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 MYL12AP19105 171 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 ADARB1P78563 741 aaKnown RBP27.02■■□□□ 1.92
CBX4-203ENST00000494546 MEF2CQ06413 473 aaPredicted RBP27.02■■□□□ 1.92
CBX4-203ENST00000494546 KISS1Q15726 138 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 RPL22L1Q6P5R6 122 aaKnown RBP27.02■■□□□ 1.92
CBX4-203ENST00000494546 CRIP3Q6Q6R5 217 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 OR4S1Q8NGB4 309 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 ZNF714Q96N38 554 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 SSX3Q99909 188 aa27.02■■□□□ 1.92
CBX4-203ENST00000494546 EXOSC4Q9NPD3 245 aaKnown RBP27.02■■□□□ 1.92
CBX4-203ENST00000494546 H3BUX3 64 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 SH2D1BO14796 132 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 ALX3O95076 343 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 TMEM225BP0DP42 221 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 PAX6P26367 422 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 CCDC58Q4VC31 144 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 TCF23Q7RTU1 214 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 SAXO1Q8IYX7 474 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 PPP1R35Q8TAP8 253 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 WFDC12Q8WWY7 111 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 RGP1Q92546 391 aaPredicted RBP27.01■■□□□ 1.91
CBX4-203ENST00000494546 DIMT1Q9UNQ2 313 aaKnown RBP27.01■■□□□ 1.91
CBX4-203ENST00000494546 PCDHGB5Q9Y5G0 923 aa27.01■■□□□ 1.91
CBX4-203ENST00000494546 OR2H2O95918 312 aa27■■□□□ 1.91
CBX4-203ENST00000494546 CDK5R1Q15078 307 aa27■■□□□ 1.91
CBX4-203ENST00000494546 EXOSC1Q9Y3B2 195 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms