RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TRIM77I1YAP6 450 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 ENSAO43768 121 aaKnown RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 HLA-DQB1P01920 261 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 APOA1P02647 267 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 IL7P13232 177 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 MUC1P15941 1255 aaPredicted RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 EGR1P18146 543 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 PRDX4Q13162 271 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 C11orf91Q3C1V1 193 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 BCL2L15Q5TBC7 163 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 TMEM244Q5VVB8 128 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 FAM90A1Q86YD7 464 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 ZDHHC23Q8IYP9 409 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 BOLLQ8N9W6 283 aaKnown RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 OR10AC1Q8NH08 325 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 FAM216AQ8WUB2 273 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 TSEN15Q8WW01 171 aaKnown RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 HPSE2Q8WWQ2 592 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 TMEM106AQ96A25 262 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 GFI1Q99684 422 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 NUDT16L1Q9BRJ7 211 aaKnown RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 RABL2AQ9UBK7 228 aaPredicted RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 KAAG1Q9UBP8 84 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 SPATA2Q9UM82 520 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 RABL2BQ9UNT1 228 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 DHDHQ9UQ10 334 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 SLC22A13Q9Y226 551 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 AK6Q9Y3D8 172 aaKnown RBP10.96□□□□□ -0.65
ERCC3-209ENST00000494464 V9GY05 133 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 ZNF816-ZNF321PA0A0X1KG74 233 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 SRRM5B3KS81 715 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 C22orf46C9J442 243 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.95□□□□□ -0.66
ERCC3-209ENST00000494464 ADAM20O43506 726 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 CD2P06729 351 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 CALCBP10092 127 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 SLC2A2P11168 524 aaPredicted RBP10.95□□□□□ -0.66
ERCC3-209ENST00000494464 ELK1P19419 428 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 TALDO1P37837 337 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 MAP2K3P46734 347 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 SOX2P48431 317 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 FAM76BQ5HYJ3 339 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 ZBTB37Q5TC79 503 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 CD276Q5ZPR3 534 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 BAIAP2L2Q6UXY1 529 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 C9orf139Q6ZV77 190 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 DOK3Q7L591 496 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 ELMOD2Q8IZ81 293 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 POC5Q8NA72 575 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 OR51A4Q8NGJ6 313 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 OR10Z1Q8NGY1 313 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 OR5P3Q8WZ94 311 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 TECTBQ96PL2 329 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 PBOV1Q9GZY1 135 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 GTF2A1LQ9UNN4 478 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 FOXJ3Q9UPW0 622 aa10.95□□□□□ -0.66
ERCC3-209ENST00000494464 TRAV40A0A0B4J280 105 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 LOC107986453A0A1B0GWG9 222 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 ZNF850A8MQ14 1090 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 FAM25AB3EWG3 89 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 FAM25CB3EWG5 89 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 FAM25GB3EWG6 89 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 CDIPTO14735 213 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 PLATP00750 562 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 GYPAP02724 150 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 EIF4EP06730 217 aaKnown RBP10.94□□□□□ -0.66
ERCC3-209ENST00000494464 LIPFP07098 398 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 AZGP1P25311 298 aaKnown RBP10.94□□□□□ -0.66
ERCC3-209ENST00000494464 BAK1Q16611 211 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 MICBQ29980 383 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 PYDC2Q56P42 97 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 RDH10Q8IZV5 341 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 OR8H2Q8N162 312 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 SAMD12Q8N8I0 201 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 ZDHHC22Q8N966 263 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 C22orf15Q8WYQ4 148 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 FGF23Q9GZV9 251 aaPredicted RBP10.94□□□□□ -0.66
ERCC3-209ENST00000494464 ESM1Q9NQ30 184 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 GPR84Q9NQS5 396 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 ZNF69Q9UC07 566 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
ERCC3-209ENST00000494464 TRAV8-7A0A075B6U6 113 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 IGHV3OR15-7A0A075B7D8 119 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 TMPRSS2O15393 492 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 PAHP00439 452 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 TTRP02766 147 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 IGHV4-38-2P0DP08 117 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
ERCC3-209ENST00000494464 IGFBP3P17936 291 aaPredicted RBP10.93□□□□□ -0.66
ERCC3-209ENST00000494464 SCN1BQ07699 218 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 ASAH1Q13510 395 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 IL18Q14116 193 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 PYHIN1Q6K0P9 492 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
ERCC3-209ENST00000494464 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
ERCC3-209ENST00000494464 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms