RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KAAG1Q9UBP8 84 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF222Q9UK12 451 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CR1P17927 2039 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 VPS13CQ709C8 3753 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 A0A1W2PP11 408 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 SH2D1BO14796 132 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-223ENST00000494123 NDUFB3O43676 98 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 IL1AP01583 271 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 CHRM2P08172 466 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 MGMTP16455 207 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 TMBIM6P55061 237 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 GNB2P62879 340 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 SCN1BQ07699 218 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 IKZF1Q13422 519 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF146Q15072 292 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 FAM166AQ6J272 317 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF561Q8N587 486 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 Q8NFD4 153 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 OR51D1Q8NGF3 324 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 KCNG3Q8TAE7 436 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 SLC25A28Q96A46 364 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 FAM3DQ96BQ1 224 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
BRCA1-223ENST00000494123 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 C1orf147Q96MC9 270 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-223ENST00000494123 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 BANF2Q9H503 90 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
BRCA1-223ENST00000494123 MAST4O15021 2626 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 A0A0G2JK05 382 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 SIGLEC5O15389 551 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 MPIG6BO95866 241 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 SLC2A2P11168 524 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF44P15621 663 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 COL10A1Q03692 680 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 BLMHQ13867 455 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM249Q2WGJ8 235 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 LRRC10Q5BKY1 277 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 USP43Q70EL4 1123 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 ASCC1Q8N9N2 400 aaKnown RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM104Q8NE00 496 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM185AQ8NFB2 350 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 SDSLQ96GA7 329 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 BCL7BQ9BQE9 202 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 SELENOIQ9C0D9 397 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 LIN7BQ9HAP6 207 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 CTSZQ9UBR2 303 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
BRCA1-223ENST00000494123 A0A1B0GW55 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 SIRPB1O00241 398 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DVL1O14640 695 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DEGS1O15121 323 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 CD99P14209 185 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 AMY2BP19961 511 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 CFPP27918 469 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 NPY4RP50391 375 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
BRCA1-223ENST00000494123 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 IDNKQ5T6J7 187 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 OR10K2Q6IF99 312 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4L9Q6RFH8 374 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-223ENST00000494123 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 CROCCP3Q8IVE0 287 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 ST8SIA4Q92187 359 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 KCNK15Q9H427 330 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 LPAR2Q9HBW0 351 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
BRCA1-223ENST00000494123 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 FOXH1O75593 365 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 OR2H2O95918 312 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 SELLP14151 372 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 NDUFB7P17568 137 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms