RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 HLA-GP17693 338 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 CXCL2P19875 107 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 CA6P23280 308 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 VAMP1P23763 118 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 OPRM1P35372 400 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 PTGER4P35408 488 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 MPV17P39210 176 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 TDGF1P3P51864 188 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 PER3P56645 1201 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 IL24Q13007 206 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 BAMBIQ13145 260 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 MRPL49Q13405 166 aaKnown RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 IL13RA2Q14627 380 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 PDCD1Q15116 288 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 SURF2Q15527 256 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 IGFBP7Q16270 282 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 PLEKHN1Q494U1 663 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF324BQ6AW86 544 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 LIN54Q6MZP7 749 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 HAGHLQ6PII5 290 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 SLC22A25Q6T423 547 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 FAM180AQ6UWF9 173 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF767PQ75MW2 155 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 BHLHA15Q7RTS1 189 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 MKXQ8IYA7 352 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF610Q8N9Z0 462 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 UXS1Q8NBZ7 420 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 TMEM185AQ8NFB2 350 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 EXTL1Q92935 676 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF488Q96MN9 340 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 HIST1H2AAQ96QV6 131 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 RTL8AQ9BWD3 113 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF286AQ9HBT8 521 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF71Q9NQZ8 489 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 MTCH1Q9NZJ7 389 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 ITGB1BP2Q9UKP3 347 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 AMDHD2Q9Y303 409 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 URB1O60287 2271 aaKnown RBP9.09□□□□□ -0.95
CLCN6-208ENST00000494028 IGHV1-18A0A0C4DH31 117 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 FAM221AA4D161 298 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 LRP5LA4QPB2 252 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 OR5H1A6NKK0 313 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 DBX1A6NMT0 343 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 TRAPPC2LH3BP13 241 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 TSC22D2O75157 780 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 CD8AP01732 235 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 RAC2P15153 192 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 AKR1C4P17516 323 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 PRKACAP17612 351 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 PI3P19957 117 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 FUT3P21217 361 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 SSTR2P30874 369 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 CALCRP30988 508 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 ECI1P42126 302 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
CLCN6-208ENST00000494028 SORDQ00796 357 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 ALKBH6Q3KRA9 238 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF573Q86YE8 665 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 Q8NA96 180 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 OR1J1Q8NGS3 322 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 LILRB4Q8NHJ6 448 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 FAM57AQ8TBR7 257 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 CASTOR1Q8WTX7 329 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 PHB2Q99623 299 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 MICU1Q9BPX6 476 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 RTBDNQ9BSG5 229 aaPredicted RBP9.09□□□□□ -0.95
CLCN6-208ENST00000494028 OR51I2Q9H344 312 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 LIME1Q9H400 295 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 FRYQ5TBA9 3013 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 APC2O95996 2303 aa9.09□□□□□ -0.95
CLCN6-208ENST00000494028 FXYD6-FXYD2A0A087WZ82 144 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 A0A0B4J2A0 478 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 IGHV2OR16-5A0A0B4J2B6 119 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 M0R233 179 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 RHBDL1O75783 438 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 MPC2O95563 127 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 NAPSAO96009 420 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 CTSDP07339 412 aaPredicted RBP9.08□□□□□ -0.96
CLCN6-208ENST00000494028 PGAM2P15259 253 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SELEP16581 610 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 IL13RA1P78552 427 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 IKZF1Q13422 519 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 P2RY6Q15077 328 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SLC9A3R2Q15599 337 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 GRK1Q15835 563 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 TMEM128Q5BJH2 165 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 TMEM211Q6ICI0 200 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 Q6ZS49 121 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SLC7A5P1Q8MH63 180 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 FAM210AQ96ND0 272 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SCGB3A2Q96PL1 93 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF2Q9BSG1 426 aaPredicted RBP9.08□□□□□ -0.96
CLCN6-208ENST00000494028 ZNF442Q9H7R0 627 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 DECR2Q9NUI1 292 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 NECAP2Q9NVZ3 263 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SHPKQ9UHJ6 478 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 MSRB2Q9Y3D2 182 aa9.08□□□□□ -0.96
CLCN6-208ENST00000494028 SLC25A15Q9Y619 301 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms