RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RIPK1Q13546 671 aa13.27□□□□□ -0.29
SATB1-217ENST00000493952 PDZD9Q8IXQ8 264 aa13.27□□□□□ -0.29
SATB1-217ENST00000493952 ASCC1Q8N9N2 400 aaKnown RBP13.27□□□□□ -0.29
SATB1-217ENST00000493952 ZFAND2BQ8WV99 257 aa13.27□□□□□ -0.29
SATB1-217ENST00000493952 ORAI1Q96D31 301 aa13.27□□□□□ -0.29
SATB1-217ENST00000493952 C1orf147Q96MC9 270 aaPredicted RBP13.27□□□□□ -0.29
SATB1-217ENST00000493952 TRBV5-5A0A0J9YX44 114 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 DNAJC9-AS1A6NH13 148 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 PTGES3LE9PB15 166 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 TRIM77I1YAP6 450 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 M0R1W7 72 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 KDM4BO94953 1096 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 HAND1O96004 215 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 DUSP1P28562 367 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 TAS2R43P59537 309 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 UBA52P62987 128 aaKnown RBP13.26□□□□□ -0.29
SATB1-217ENST00000493952 SLC35A2P78381 396 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 DEFB112Q30KQ8 113 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 YIF1BQ5BJH7 314 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 METAP1DQ6UB28 335 aaPredicted RBP13.26□□□□□ -0.29
SATB1-217ENST00000493952 FIP1L1Q6UN15 594 aaKnown RBP13.26□□□□□ -0.29
SATB1-217ENST00000493952 SAXO1Q8IYX7 474 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 OR4M1Q8NGD0 313 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 DUX5Q96PT3 197 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 HMG20AQ9NP66 347 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 SCN3BQ9NY72 215 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 ERGIC3Q9Y282 383 aa13.26□□□□□ -0.29
SATB1-217ENST00000493952 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 RNASEK-C17orf49H0YIS7 233 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 GABRPO00591 440 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 CELP19835 753 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 RPL31P62899 125 aaKnown RBP13.25□□□□□ -0.29
SATB1-217ENST00000493952 BAMBIQ13145 260 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 KLRD1Q13241 179 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 ZNF146Q15072 292 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 Q499Y3 187 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 SPIN3Q5JUX0 258 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 RNLSQ5VYX0 342 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 C17orf107Q6ZR85 190 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 C1orf122Q6ZSJ8 110 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
SATB1-217ENST00000493952 OR52N4Q8NGI2 321 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 NKX3-1Q99801 234 aaPredicted RBP13.25□□□□□ -0.29
SATB1-217ENST00000493952 MND1Q9BWT6 205 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 CDCA4Q9BXL8 241 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 SEBOXQ9HB31 216 aaPredicted RBP13.25□□□□□ -0.29
SATB1-217ENST00000493952 DNHD1Q96M86 4753 aa13.25□□□□□ -0.29
SATB1-217ENST00000493952 MAGEB3O15480 346 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 TMEM225BP0DP42 221 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 IGFBP3P17936 291 aaPredicted RBP13.24□□□□□ -0.29
SATB1-217ENST00000493952 HSPA13P48723 471 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 ZNF273Q14593 569 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 TMEM200BQ69YZ2 307 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 SATL1Q86VE3 508 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 OR8H2Q8N162 312 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 FAM216AQ8WUB2 273 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 CPNE2Q96FN4 548 aaPredicted RBP13.24□□□□□ -0.29
SATB1-217ENST00000493952 SNX22Q96L94 193 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 OR14A2Q96R54 314 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 GPER1Q99527 375 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 DUSP21Q9H596 190 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
SATB1-217ENST00000493952 RHOFQ9HBH0 211 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 LSM2Q9Y333 95 aaKnown RBP13.24□□□□□ -0.29
SATB1-217ENST00000493952 TPRKBQ9Y3C4 175 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
SATB1-217ENST00000493952 MAGEA13PA6NCF6 341 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 SIRPB1O00241 398 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 PSPNO60542 156 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 ALDOBP05062 364 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 CD1AP06126 327 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 CCL3L1P16619 93 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 PRTN3P24158 256 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 EDDM3BP56851 147 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 PPP3R1P63098 170 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 GUCA2AQ02747 115 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 BLMHQ13867 455 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 IRF3Q14653 427 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 DDI2Q5TDH0 399 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 GDPD3Q7L5L3 318 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 C11orf42Q8N5U0 333 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 OR5M11Q96RB7 305 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 CHST6Q9GZX3 395 aa13.23□□□□□ -0.29
SATB1-217ENST00000493952 UNKLQ9H9P5 680 aaKnown RBP13.23□□□□□ -0.29
SATB1-217ENST00000493952 EXOSC4Q9NPD3 245 aaKnown RBP13.23□□□□□ -0.29
SATB1-217ENST00000493952 TRAV8-7A0A075B6U6 113 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 TRBV5-7A0A0A0MS05 114 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 A0A1W2PPK0 400 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 A0A1W2PRD5 423 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 A0A1W2PRF3 423 aa13.22□□□□□ -0.29
SATB1-217ENST00000493952 A0A1W2PRM7 423 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms