RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FAM58AQ8N1B3 248 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 SYS1Q8N2H4 156 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 CCNYL1Q8N7R7 359 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 OR6N2Q8NGY6 317 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 QKIQ96PU8 341 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMC4-223ENST00000493695 OR2A7Q96R45 310 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 SLC38A1Q9H2H9 487 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 DUSP21Q9H596 190 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 STMN3Q9NZ72 180 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 VAPAQ9P0L0 249 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 ZNF230Q9UIE0 474 aaPredicted RBP1.56□□□□□ -2.16
SMC4-223ENST00000493695 ANXA10Q9UJ72 324 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 INSIG2Q9Y5U4 225 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 LOC389332A0A1B0GUA5 103 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 TVP23AA6NH52 213 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 RFXANKO14593 260 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 TCAPO15273 167 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 GYG2O15488 501 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ENTPD6O75354 484 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 CXorf1O96002 111 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 CD99P14209 185 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 TAC1P20366 129 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 BGNP21810 368 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 IMPA1P29218 277 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ATP5J2P56134 94 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 STK38Q15208 465 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 SSX1Q16384 188 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ATP6AP1LQ52LC2 224 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 CAVIN4Q5BKX8 364 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 TMEM215Q68D42 235 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ZNF660Q6AZW8 331 aaPredicted RBP1.55□□□□□ -2.16
SMC4-223ENST00000493695 GLYATQ6IB77 296 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 PID1Q7Z2X4 250 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 LY6G5BQ8NDX9 201 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 PORCNQ9H237 461 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ACOT13Q9NPJ3 140 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ASF1BQ9NVP2 202 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 RAB23Q9ULC3 237 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 PRR14LQ5THK1 2151 aa1.55□□□□□ -2.16
SMC4-223ENST00000493695 ZNF407Q9C0G0 2248 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 A0A1B0GXF2 115 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 D6RAR5 112 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 UPK2O00526 184 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ISLRO14498 428 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ZMPSTE24O75844 475 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 DHRS3O75911 302 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 IGHV3-53P01767 116 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 CD9P21926 228 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 CNTFRP26992 372 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ARR3P36575 388 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 KLF3P57682 345 aaPredicted RBP1.54□□□□□ -2.16
SMC4-223ENST00000493695 VAMP3Q15836 100 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 LIN9Q5TKA1 542 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 TCF24Q7RTU0 167 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 AMN1Q8IY45 258 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ZFP82Q8N141 532 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 OR8S1Q8NH09 359 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 OR51Q1Q8NH59 317 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ACTL9Q8TC94 416 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 OR2M4Q96R27 311 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 ZNF443Q9Y2A4 671 aaPredicted RBP1.54□□□□□ -2.16
SMC4-223ENST00000493695 CACNA1DQ01668 2161 aa1.54□□□□□ -2.16
SMC4-223ENST00000493695 IGHV3-21A0A0B4J1V1 117 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 E7EWF7 191 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 COX7A2P2O60397 106 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 BRD4O60885 1362 aaPredicted RBP1.53□□□□□ -2.16
SMC4-223ENST00000493695 CSTAP01040 98 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 RLN2P04090 185 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 CGB3P0DN86 165 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 CGB7P0DN87 165 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 GUSBP1Q15486 140 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 ACTL10Q5JWF8 245 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 FAHD1Q6P587 224 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 Q6ZQT7 251 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 TPGS1Q6ZTW0 290 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 ASCC1Q8N9N2 400 aaKnown RBP1.53□□□□□ -2.16
SMC4-223ENST00000493695 OR2M3Q8NG83 312 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 OR2K2Q8NGT1 345 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 OR6K2Q8NGY2 324 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 CMTM2Q8TAZ6 248 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 LGALS14Q8TCE9 139 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 CCL17Q92583 94 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 RBPMSQ93062 196 aaKnown RBP1.53□□□□□ -2.16
SMC4-223ENST00000493695 ADTRPQ96IZ2 230 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 UTP23Q9BRU9 249 aaKnown RBP1.53□□□□□ -2.16
SMC4-223ENST00000493695 SRRQ9GZT4 340 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 ABCG5Q9H222 651 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 PLEKHA1Q9HB21 404 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 ANKHQ9HCJ1 492 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 RMND1Q9NWS8 449 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 RBM12B-AS1Q9P1G2 102 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 TRAPPC1Q9Y5R8 145 aa1.53□□□□□ -2.16
SMC4-223ENST00000493695 IGLV10-54A0A075B6I4 117 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 MYBPHLA2RUH7 354 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 CD300LBA8K4G0 201 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 A8MWP4 228 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 ZNF878C9JN71 531 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 H0YC42 278 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 HLA-AP01891 365 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms