RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 GRK1Q15835 563 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 NSUN5P1Q3KNT7 163 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ARSJQ5FYB0 599 aaPredicted RBP13.4□□□□□ -0.26
PTPRU-208ENST00000493601 MINOS1Q5TGZ0 78 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 C1orf146Q5VVC0 180 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 CCBE1Q6UXH8 406 aaPredicted RBP13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ZBTB49Q6ZSB9 765 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 AMIGO2Q86SJ2 522 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ZNF676Q8N7Q3 588 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 GLS2Q9UI32 602 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 MINOS1-NBL1R4GNA1 71 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 IGHV2-26A0A0B4J1V2 119 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 H3BUI4 141 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 XPNPEP2O43895 674 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 IGHA1P01876 353 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 AZGP1P25311 298 aaKnown RBP13.39□□□□□ -0.27
PTPRU-208ENST00000493601 KIR3DL2P43630 455 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 ATP1B3P54709 279 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 CDC42P60953 191 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 ISL1P61371 349 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 EMX1Q04741 257 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-208ENST00000493601 ZNF91Q05481 1191 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 SPIN3Q5JUX0 258 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 LDLRAD2Q5SZI1 272 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 FAM58AQ8N1B3 248 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 NDNFQ8TB73 568 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 CLEC7AQ9BXN2 247 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 CHST6Q9GZX3 395 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 RBFOX1Q9NWB1 397 aaKnown RBP13.39□□□□□ -0.27
PTPRU-208ENST00000493601 IL36RNQ9UBH0 155 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 OAZ3Q9UMX2 235 aa13.39□□□□□ -0.27
PTPRU-208ENST00000493601 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 MGST3O14880 152 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 CD28P10747 220 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 ZNF20P17024 532 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 BCL3P20749 454 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 PRKACBP22694 351 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
PTPRU-208ENST00000493601 POU3F4P49335 361 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 MTCP1P56278 107 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 SLC34A1Q06495 639 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 IL18R1Q13478 541 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 ZNF146Q15072 292 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 TP53I3Q53FA7 332 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 TMEM244Q5VVB8 128 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 LHFPL2Q6ZUX7 228 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 UTS2BQ765I0 119 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 TRAPPC6BQ86SZ2 158 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 LYG1Q8N1E2 194 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 TPRX1Q8N7U7 411 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 OR4F17Q8NGA8 305 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 EME1Q96AY2 570 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 SPSB1Q96BD6 273 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 CENPNQ96H22 339 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-208ENST00000493601 OR4F4Q96R69 305 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 TMEM133Q9H2Q1 129 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 HILPDAQ9Y5L2 63 aa13.38□□□□□ -0.27
PTPRU-208ENST00000493601 PSPNO60542 156 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 ENTPD6O75354 484 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 OCM2P0CE71 109 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 OCMP0CE72 109 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-208ENST00000493601 PRKACAP17612 351 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 VDAC2P45880 294 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-208ENST00000493601 NPBWR2P48146 333 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 ZNF85Q03923 595 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 OR52N4Q8NGI2 321 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 OR2G2Q8NGZ5 317 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-208ENST00000493601 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-208ENST00000493601 WNT10AQ9GZT5 417 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 GAL3ST2Q9H3Q3 398 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 IMPAD1Q9NX62 359 aa13.37□□□□□ -0.27
PTPRU-208ENST00000493601 UBE2J1Q9Y385 318 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-208ENST00000493601 IGKV1-9A0A0C4DH69 117 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 ATP5HO75947 161 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 ISG15P05161 165 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 ATF1P18846 271 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 HTR1DP28221 377 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 DUSP1P28562 367 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 ERP29P30040 261 aaKnown RBP13.36□□□□□ -0.27
PTPRU-208ENST00000493601 OR3A1P47881 315 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 ARHGDIBP52566 201 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 P2RX3P56373 397 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 FBLN7Q53RD9 439 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 KCTD20Q7Z5Y7 419 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 TRUB1Q8WWH5 349 aaKnown RBP13.36□□□□□ -0.27
PTPRU-208ENST00000493601 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-208ENST00000493601 FGGYQ96C11 551 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 R3HDM4Q96D70 268 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 OPALINQ96PE5 141 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 CITED2Q99967 270 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-208ENST00000493601 MMP28Q9H239 520 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
PTPRU-208ENST00000493601 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 FUOMA2VDF0 154 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 SH2D1BO14796 132 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms