RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PCDHB16Q9NRJ7 776 aa11.2□□□□□ -0.62
PRPF40A-211ENST00000493468 GPR173Q9NS66 373 aa11.2□□□□□ -0.62
PRPF40A-211ENST00000493468 DHRS7CA6NNS2 312 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 MGST3O14880 152 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 IGHG2P01859 326 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 INSL3P51460 131 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 PRAMEF5Q5TYX0 476 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 SLX4IPQ5VYV7 408 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 FOXRED2Q8IWF2 684 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 STPG2Q8N412 459 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 OTULINQ96BN8 352 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 CDRT15Q96T59 188 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 OR51V1Q9H2C8 321 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 DCLRE1BQ9H816 532 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 ZMAT4Q9H898 229 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 LAMP5Q9UJQ1 280 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 V9GYS6 101 aa11.19□□□□□ -0.62
PRPF40A-211ENST00000493468 A0A087X0M5 115 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 A0A1B0GX30 115 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 F8VVB4 439 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 F8VWA3 439 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF254O75437 659 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 E2F6O75461 281 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 HAND1O96004 215 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 IGHA1P01876 353 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 HSD17B1P14061 328 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 CDK2P24941 298 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 P2RX3P56373 397 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ESRRGP62508 458 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ROM1Q03395 351 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 FHL3Q13643 280 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF829Q3KNS6 432 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 BAIAP2L2Q6UXY1 529 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 CD300LDQ6UXZ3 194 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 Q6ZSR3 168 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 TRAPPC6BQ86SZ2 158 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ANGPTL5Q86XS5 388 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ENTHD1Q8IYW4 607 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 RNF152Q8N8N0 203 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 CORO2AQ92828 525 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 MROQ9BYG7 248 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF286AQ9HBT8 521 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 TAS2R3Q9NYW6 316 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 MTCH1Q9NZJ7 389 aa11.18□□□□□ -0.62
PRPF40A-211ENST00000493468 TRGV10A0A0A0MS01 117 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 PRR23D1E9PI22 279 aaPredicted RBP11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 CCRL2O00421 344 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 PSPNO60542 156 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 CCDC22O60826 627 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 TTRP02766 147 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 PRR23D2P0DMB1 279 aaPredicted RBP11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 GABRR1P24046 479 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 PRRX1P54821 245 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF91Q05481 1191 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 SLC35D3Q5M8T2 416 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 Q8IYB0 196 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 DRAM1Q8N682 238 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 GON7Q9BXV9 100 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 YIPF3Q9GZM5 350 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 CHST6Q9GZX3 395 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 MOB1AQ9H8S9 216 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 GLS2Q9UI32 602 aa11.17□□□□□ -0.62
PRPF40A-211ENST00000493468 TOR1AO14656 332 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 ARPC2O15144 300 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 LY86O95711 162 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 RPLP1P05386 114 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 MAGEA2P43356 314 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 OR3A1P47881 315 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 CBX1P83916 185 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 FOXE3Q13461 319 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 PNLIPRP3Q17RR3 467 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 ZNF679Q8IYX0 411 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 IQCF1Q8N6M8 205 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 OR14K1Q8NGZ2 314 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 ISOC1Q96CN7 298 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 EDA2RQ9HAV5 297 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 TAS2R1Q9NYW7 299 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 PLECQ15149 4684 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-211ENST00000493468 FUOMA2VDF0 154 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 AP4M1O00189 453 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 SRSF10O75494 262 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 ELANEP08246 267 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 TMEM11P17152 192 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 SLC2A5P22732 501 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 GDNFP39905 211 aa11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 RIDAP52758 137 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-211ENST00000493468 CDC42P60953 191 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms