RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 RAB39BQ96DA2 213 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 RBMXL1Q96E39 390 aaKnown RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 OR5M11Q96RB7 305 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 MND1Q9BWT6 205 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 UFSP2Q9NUQ7 469 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 TREM2Q9NZC2 230 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 MTCH1Q9NZJ7 389 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ZNF222Q9UK12 451 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 BLOC1S6Q9UL45 172 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 FOXJ3Q9UPW0 622 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 SLC7A11Q9UPY5 501 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 HERC2O95714 4834 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 TRIM64CA6NLI5 447 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 A8MV72 311 aaPredicted RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 MYL12BO14950 172 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 PIN1P1O15428 100 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 SULT1B1O43704 296 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 FOXH1O75593 365 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 MSMBP08118 114 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 IRF2P14316 349 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 GYPEP15421 78 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 CELP19835 753 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 GALP22466 123 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 LMO1P25800 156 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ZFP36P26651 326 aaKnown RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 HAAOP46952 286 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 RBP2P50120 134 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ATP1B3P54709 279 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ZP1P60852 638 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 PAX8Q06710 450 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 MLLT11Q13015 90 aaPredicted RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 PDZK1IP1Q13113 114 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 ZNF146Q15072 292 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 CARTPTQ16568 116 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 MICBQ29980 383 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ODF4Q2M2E3 257 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 Q499Y3 187 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 KCTD21Q4G0X4 260 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 FAM201AQ5SY85 155 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 AVPI1Q5T686 147 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 UBE2UQ5VVX9 321 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 PLCXD3Q63HM9 321 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 STUMQ69YW2 141 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ELP2Q6IA86 826 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 CD200R1LQ6Q8B3 271 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ACP7Q6ZNF0 438 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 LY6G5BQ8NDX9 201 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 PXT1Q8NFP0 134 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 C8orf46Q8TAG6 207 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 LRRC29Q8WV35 223 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 RPL3LQ92901 407 aaKnown RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 TMEM106AQ96A25 262 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 SDSLQ96GA7 329 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 CNBD2Q96M20 576 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 METTL17Q9H7H0 456 aaPredicted RBP5.58□□□□□ -1.52
VPS52-219ENST00000493379 TMEM138Q9NPI0 162 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 ACOT13Q9NPJ3 140 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 GPR173Q9NS66 373 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 TMEM140Q9NV12 185 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 GTF2A1LQ9UNN4 478 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 POLDIP2Q9Y2S7 368 aa5.58□□□□□ -1.52
VPS52-219ENST00000493379 IGKV1D-17A0A075B6S4 117 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 IGKV1-12A0A0C4DH73 117 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 IGHV3-64DA0A0J9YX35 117 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 KIR2DS1A0A191URI9 304 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 A6NIN4 97 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 A6NLC8 198 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 ZNF879B4DU55 563 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 TRAPPC2LH3BP13 241 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 J3QLI3 93 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 SIGLEC5O15389 551 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 AKR7A2O43488 359 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 SYNGR1O43759 233 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 KDM4BO94953 1096 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 ECDO95905 644 aaPredicted RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 TGFAP01135 160 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 FSHBP01225 129 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 IGKV1D-12P01611 117 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 CD2P06729 351 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 LIPFP07098 398 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 UCHL1P09936 223 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 OCM2P0CE71 109 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 PSG2P11465 335 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 AZGP1P25311 298 aaKnown RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 PSMA1P25786 263 aaKnown RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 TGFBR2P37173 567 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 CAV3P56539 151 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 TRAM1Q15629 374 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 KISS1Q15726 138 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 C4orf46Q504U0 113 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 WDR25Q64LD2 544 aaPredicted RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 FAM166AQ6J272 317 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 HAGHLQ6PII5 290 aaPredicted RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 LYPD2Q6UXB3 125 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms