RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 SUMO1P63165 101 aaKnown RBP12.06□□□□□ -0.48
TRIM11-204ENST00000493030 NHLRC1Q6VVB1 395 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 GPR137Q96N19 417 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 RAB40CQ96S21 281 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 TMEM208Q9BTX3 173 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 AMMECR1Q9Y4X0 333 aaPredicted RBP12.06□□□□□ -0.48
TRIM11-204ENST00000493030 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
TRIM11-204ENST00000493030 RNASEK-C17orf49H0YIS7 233 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 CDX4O14627 284 aaPredicted RBP12.06□□□□□ -0.48
TRIM11-204ENST00000493030 HSBP1O75506 76 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 CEACAM3P40198 252 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 HMGA2P52926 109 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 PSG6Q00889 435 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 FOXO1Q12778 655 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 ST3GAL2Q16842 350 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 OR10AC1Q8NH08 325 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 RND1Q92730 232 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 DOCK2Q92608 1830 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 CST4P01036 141 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 GYPAP02724 150 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 RNF165Q6ZSG1 346 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 NAA60Q9H7X0 242 aa12.06□□□□□ -0.48
TRIM11-204ENST00000493030 A0A1B0GTQ1 180 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 NTN1O95631 604 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 MVDP53602 400 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 TNXAQ16473 311 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 GUK1Q16774 197 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 TMEM65Q6PI78 240 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 TCTE3Q8IZS6 198 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 NEIL1Q96FI4 390 aaPredicted RBP12.05□□□□□ -0.48
TRIM11-204ENST00000493030 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
TRIM11-204ENST00000493030 UBTD1Q9HAC8 227 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 MRM2Q9UI43 246 aaKnown RBP12.05□□□□□ -0.48
TRIM11-204ENST00000493030 SPINT1O43278 529 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 OR4A8P0C604 315 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 Q1RN00 199 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 TEX261Q6UWH6 196 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 WDR13Q9H1Z4 485 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 U3KQ87 197 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 CCL3P10147 92 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 FABP4P15090 132 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 SIGLEC14Q08ET2 396 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 MESTQ5EB52 335 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 D2HGDHQ8N465 521 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 MPC1Q9Y5U8 109 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 CYR61O00622 381 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 ORM2P19652 201 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 AANATQ16613 207 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 GAB4Q2WGN9 574 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 WDR31Q8NA23 367 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 RREB1Q92766 1687 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 FLRT3Q9NZU0 649 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 MBD1Q9UIS9 605 aaPredicted RBP12.05□□□□□ -0.48
TRIM11-204ENST00000493030 YTHDF2Q9Y5A9 579 aaKnown RBP12.05□□□□□ -0.48
TRIM11-204ENST00000493030 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 PMCHP20382 165 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 THYN1Q9P016 225 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
TRIM11-204ENST00000493030 LYZP61626 148 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 AMDHD2Q9Y303 409 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 LANCL1O43813 399 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 AMTP48728 403 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
TRIM11-204ENST00000493030 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 TINAGQ9UJW2 476 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 K7ESF4 209 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 CDIPTO14735 213 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 PNLIPP16233 465 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 GALP22466 123 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
TRIM11-204ENST00000493030 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 NTNG2Q96CW9 530 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 PIK3IP1Q96FE7 263 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 PECRQ9BY49 303 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
TRIM11-204ENST00000493030 ATG4DQ86TL0 474 aaPredicted RBP12.04□□□□□ -0.48
TRIM11-204ENST00000493030 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 MAP1LC3B2A6NCE7 125 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 ANKRD34CP0C6C1 535 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 KIR2DL1P43626 348 aaPredicted RBP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 NOL4LQ96MY1 436 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms