RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TMEM200AQ86VY9 491 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 BEST4Q8NFU0 473 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 DACT3Q96B18 629 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 PKIBQ9C010 78 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 CXXC4Q9H2H0 198 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 PLK3Q9H4B4 646 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 ELF5Q9UKW6 265 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 LRRK2Q5S007 2527 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 DEFB108AA8MXU0 73 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 F5H5P2 479 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 HTR3BO95264 441 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 CLDN1O95832 211 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 ROS1P08922 2347 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 GTF2F2P13984 249 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 MPZP25189 248 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 RPS27AP62979 156 aaKnown RBP11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 METTL11BQ5VVY1 283 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 WDR86Q86TI4 376 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 ACBD4Q8NC06 268 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 OR2Z1Q8NG97 314 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 OR8H1Q8NGG4 311 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 PIK3IP1Q96FE7 263 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF436Q9C0F3 470 aaPredicted RBP11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 LPAR5Q9H1C0 372 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 ZSCAN5BA6NJL1 495 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 E7EQL1 145 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 J3QT63 122 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 TSC22D2O75157 780 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 DNASE1P24855 282 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 IL24Q13007 206 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF154Q13106 437 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 SLAMF9Q96A28 289 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 MRPS24Q96EL2 167 aaKnown RBP11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 NICN1Q9BSH3 213 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 SELENOIQ9C0D9 397 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 BEX1Q9HBH7 125 aa11.96□□□□□ -0.49
PDZRN3-210ENST00000492909 DOPEY2Q9Y3R5 2298 aa11.96□□□□□ -0.5
PDZRN3-210ENST00000492909 DOPEY1Q5JWR5 2465 aa11.96□□□□□ -0.5
PDZRN3-210ENST00000492909 CHD3Q12873 2000 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 TRAV18A0A075B6X5 111 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 RAB27BO00194 218 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 SYNGR1O43759 233 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 GRPP07492 148 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 SFTPBP07988 381 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 CHRM2P08172 466 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 CPT2P23786 658 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 SERPINF1P36955 418 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 VEGFCP49767 419 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF81P51508 661 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 MECP2P51608 486 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 IKZF1Q13422 519 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 NLRC3Q7RTR2 1065 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 OR56B1Q8NGI3 324 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 OR51T1Q8NGJ9 327 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 AQP3Q92482 292 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 GTF3AQ92664 365 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 NEUROG1Q92886 237 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 ELMOD3Q96FG2 381 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 HEXA-AS1Q9H8Q6 139 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 POLDIP2Q9Y2S7 368 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 C19orf84I3L1E1 186 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 PLAUP00749 431 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 IL5P05113 134 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 IGFBP2P18065 325 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 LOXP28300 417 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 APOBEC3AP31941 199 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 MOGAT2Q3SYC2 334 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 LGALSLQ3ZCW2 172 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 ELP2Q6IA86 826 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 GLDNQ6ZMI3 551 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 Q6ZTK2 550 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM89BQ8N5H3 189 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 Q8NFD4 153 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 OR10R2Q8NGX6 335 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM222BQ8WU58 562 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 MED30Q96HR3 178 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 Q96M66 194 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 TMEM204Q9BSN7 226 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 TM2D1Q9BX74 207 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 CISD1Q9NZ45 108 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 U3KQ87 197 aa11.95□□□□□ -0.5
PDZRN3-210ENST00000492909 A0A0A6YYD4 124 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 IGHV3-64DA0A0J9YX35 117 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 CDIPTO14735 213 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 SPRY3O43610 288 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 NOS1APO75052 506 aaPredicted RBP11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 RHBDL1O75783 438 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 PTHLHP12272 177 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 BCL3P20749 454 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms