RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MMP9P14780 707 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TGFBR2P37173 567 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SNU13P55769 128 aaKnown RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 MLLT11Q13015 90 aaPredicted RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF146Q15072 292 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SPIN3Q5JUX0 258 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 LIPKQ5VXJ0 399 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ASCC1Q8N9N2 400 aaKnown RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PXT1Q8NFP0 134 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 DMRTB1Q96MA1 342 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 YTHDF1Q9BYJ9 559 aaKnown RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 FAM192AQ9GZU8 254 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 FAM234AQ9H0X4 552 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SEBOXQ9HB31 216 aaPredicted RBP13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 NOX4Q9NPH5 578 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ONECUT1Q9UBC0 465 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 GLS2Q9UI32 602 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TRBV23-1A0A0A0MS06 115 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TRAV40A0A0B4J280 105 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 A0A1W2PQ09 198 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PIN1P1O15428 100 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TK1P04183 234 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR3A4PP47883 348 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ARF6P62330 175 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TPBGQ13641 420 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ACSM3Q53FZ2 586 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 UNQ9370/PRO34162Q6UXP9 181 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF367Q7RTV3 350 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 KIR3DL3Q8N743 410 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 MGLLQ99685 303 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 NKX3-1Q99801 234 aaPredicted RBP13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PCGF1Q9BSM1 259 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SIRPDQ9H106 197 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 GSTK1Q9Y2Q3 226 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 KPTNQ9Y664 436 aa13.43□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 MAGEA13PA6NCF6 341 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 K7N7A8 449 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF737O75373 536 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 CPEP16870 476 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 DUSP1P28562 367 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PTGFRP43088 359 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 MTNR1BP49286 362 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 BMXP51813 675 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 INSL4Q14641 139 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 RSU1Q15404 277 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 CMTM4Q8IZR5 234 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 FAM185AQ8N0U4 392 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SVOPQ8N4V2 548 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SNX22Q96L94 193 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TBX15Q96SF7 602 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 EXOSC4Q9NPD3 245 aaKnown RBP13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ACOT13Q9NPJ3 140 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 WNK2Q9Y3S1 2297 aa13.42□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 IGHV3OR16-10A0A075B7F0 116 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SH2D1BO14796 132 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SC5DO75845 299 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 MAS1P04201 325 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 GABRR1P24046 479 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 RPS25P62851 125 aaKnown RBP13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 EMX1Q04741 257 aaPredicted RBP13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PDCD1Q15116 288 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TRAM1Q15629 374 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ELP2Q6IA86 826 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ASCL4Q6XD76 172 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR8H2Q8N162 312 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 BPIFB2Q8N4F0 458 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 METTL9Q9H1A3 318 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 C19orf12Q9NSK7 152 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF69Q9UC07 566 aa13.41□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TMEM82A0PJX8 343 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 M0R1W7 72 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 SIRPB1O00241 398 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 TCF21O43680 179 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR2H2O95918 312 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 FPR2P25090 351 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PSMA1P25786 263 aaKnown RBP13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 RPL31P62899 125 aaKnown RBP13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 FAM27D1Q5T7N8 215 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 GPR157Q5UAW9 335 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 C17orf107Q6ZR85 190 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 GDPD3Q7L5L3 318 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 VMO1Q7Z5L0 202 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 CEACAM19Q7Z692 300 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 CDH26Q8IXH8 852 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 PHC2Q8IXK0 858 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 JAGN1Q8N5M9 183 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 NKAIN3Q8N8D7 197 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR4M1Q8NGD0 313 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR5D13Q8NGL4 314 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 OR10K1Q8NGX5 313 aa13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 ZNF418Q8TF45 676 aaPredicted RBP13.4□□□□□ -0.26
MSH5-SAPCD1-206ENST00000491552 C22orf15Q8WYQ4 148 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms