RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 SERTAD4Q9NUC0 356 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 TRBV2A0A0J9YWF9 115 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 hADV38S2A0JD32 116 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 G3V4G9 280 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 OPN1MWP04001 364 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 CALCBP10092 127 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 JUNBP17275 347 aaPredicted RBP11□□□□□ -0.65
COL6A3-211ENST00000491233 PRKACAP17612 351 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 BCL3P20749 454 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 GABRR1P24046 479 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 AZGP1P25311 298 aaKnown RBP11□□□□□ -0.65
COL6A3-211ENST00000491233 PEX2P28328 305 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 DUSP1P28562 367 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 NPBWR2P48146 333 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 RBP2P50120 134 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 ATP1B3P54709 279 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 CDC42P60953 191 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 ENTHD1Q8IYW4 607 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 ZNF676Q8N7Q3 588 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 DNAAF1Q8NEP3 725 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 OR2G2Q8NGZ5 317 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 MALSU1Q96EH3 234 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 CDCA4Q9BXL8 241 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 PITPNC1Q9UKF7 332 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 SESN1Q9Y6P5 492 aa11□□□□□ -0.65
COL6A3-211ENST00000491233 IGHV2-26A0A0B4J1V2 119 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 F2RL2O00254 374 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 PSPNO60542 156 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 ENTPD6O75354 484 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 CIB2O75838 187 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 ATP5HO75947 161 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 CYB5AP00167 134 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 ZNF20P17024 532 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 ATF1P18846 271 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 MTCP1P56278 107 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 OR12D2P58182 307 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 TMEM244Q5VVB8 128 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 FAM58AQ8N1B3 248 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 Q8N2B8 174 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 OR4S1Q8NGB4 309 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 NDNFQ8TB73 568 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 RFT1Q96AA3 541 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 OPALINQ96PE5 141 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
COL6A3-211ENST00000491233 SIRPB1O00241 398 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 MGST3O14880 152 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 CD28P10747 220 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 PRKACBP22694 351 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 OR3A1P47881 315 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 DYNLT3P51808 116 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 P2RX3P56373 397 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 NANOS3P60323 173 aaKnown RBP10.98□□□□□ -0.65
COL6A3-211ENST00000491233 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 ZNF146Q15072 292 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 NSUN5P1Q3KNT7 163 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 TMEM95Q3KNT9 176 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 ARSJQ5FYB0 599 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-211ENST00000491233 SPIN3Q5JUX0 258 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 SAMD5Q5TGI4 173 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 LHFPL2Q6ZUX7 228 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 UTS2BQ765I0 119 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 TRAPPC6BQ86SZ2 158 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 OR10AC1Q8NH08 325 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 SPSB1Q96BD6 273 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 FGGYQ96C11 551 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 OR5M11Q96RB7 305 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 MBOAT4Q96T53 435 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 CLEC7AQ9BXN2 247 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 PRSS22Q9GZN4 317 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 TMEM133Q9H2Q1 129 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 SEBOXQ9HB31 216 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-211ENST00000491233 FRRS1LQ9P0K9 344 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
COL6A3-211ENST00000491233 DAPL1A0PJW8 107 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 EI24O14681 340 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 SLC16A6O15403 523 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 PEX14O75381 377 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 MMP23AO75900 390 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 ISG15P05161 165 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 HTR1AP08908 422 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 OCM2P0CE71 109 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 OCMP0CE72 109 aaPredicted RBP10.97□□□□□ -0.65
COL6A3-211ENST00000491233 PRAMEF5Q5TYX0 476 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 FDX2Q6P4F2 183 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 OR5D18Q8NGL1 313 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 OR13C9Q8NGT0 318 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 WIPF2Q8TF74 440 aaPredicted RBP10.97□□□□□ -0.65
COL6A3-211ENST00000491233 PYDC1Q8WXC3 89 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 SPACA5Q96QH8 159 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 EXOSC4Q9NPD3 245 aaKnown RBP10.97□□□□□ -0.65
COL6A3-211ENST00000491233 GLS2Q9UI32 602 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms