RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DDIT4LQ96D03 193 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 DHRS9Q9BPW9 319 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 LHX5Q9H2C1 402 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 DNAJC27Q9NZQ0 273 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 XCL2Q9UBD3 114 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ARL5AQ9Y689 179 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 NFASCO94856 1347 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 FHAD1B1AJZ9 1412 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 TRAV39A0A0B4J263 110 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 IGKV1D-13A0A0B4J2D9 117 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CEACAM18A8MTB9 384 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 F5H5K5 113 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 AZIN1O14977 448 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 STX10O60499 249 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC22A5O76082 557 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 SOX14O95416 240 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CTDNEP1O95476 244 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZDHHC11BP0C7U3 371 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 IGKV1-13P0DP09 117 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 UCHL3P15374 230 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 ATF6P18850 670 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 PSMB9P28065 219 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 TGFBR2P37173 567 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CYB561P49447 251 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 VSX2P58304 361 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 S100A12P80511 92 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM3AP98173 230 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 EIF4EBP1Q13541 118 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 FZD2Q14332 565 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 QPRTQ15274 297 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC9A3R2Q15599 337 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CLEC12BQ2HXU8 276 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 HLA-DRB5Q30154 266 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CPNE9Q8IYJ1 553 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 STK40Q8N2I9 435 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 CYB561D1Q8N8Q1 229 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 PXT1Q8NFP0 134 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 STOML3Q8TAV4 291 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 DYDC1Q8WWB3 177 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 PYDC1Q8WXC3 89 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM3DQ96BQ1 224 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 AURKBQ96GD4 344 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 BTN2A3PQ96KV6 586 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 PGLYRP3Q96LB9 341 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 MAP1LC3AQ9H492 121 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 BATF3Q9NR55 127 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 DDIT4Q9NX09 232 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 ANXA10Q9UJ72 324 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 TIMM22Q9Y584 194 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 UBIAD1Q9Y5Z9 338 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 ROCK1Q13464 1354 aa2.94□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZFYVE9O95405 1425 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 GNG14A0A1W2PPG7 69 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 PHYHO14832 338 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TCAPO15273 167 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 RAD1O60671 282 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 BGLAPP02818 100 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 GNAO1P09471 354 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR5H8P0DN80 308 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 HIST1H1EP10412 219 aaKnown RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF30P17039 623 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 CD79BP40259 229 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TTPAP49638 278 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 FGF8P55075 233 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TCL1AP56279 114 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 MTPNP58546 118 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 RANP62826 216 aaKnown RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 AQP6Q13520 282 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 UBE2SQ16763 222 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 SAXO2Q658L1 398 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TMED4Q7Z7H5 227 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 S100A7AQ86SG5 101 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 RIMKLAQ8IXN7 391 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 GAPTQ8N292 157 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR1M1Q8NGA1 313 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR2D3Q8NGH3 330 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 C16orf78Q8WTQ4 265 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 SMIM12Q96EX1 92 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 RDH12Q96NR8 316 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 PHB2Q99623 299 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 SULT4A1Q9BR01 284 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 C12orf4Q9NQ89 552 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 DIABLOQ9NR28 239 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 RGS18Q9NS28 235 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 C19orf12Q9NSK7 152 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TRMT112Q9UI30 125 aaKnown RBP2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 TP53TG1Q9Y2A0 90 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 ALG5Q9Y673 324 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZNF532Q9HCE3 1301 aa2.93□□□□□ -1.94
HMGB1P38-201ENST00000490557 CEMIPQ8WUJ3 1361 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 GOLGA6L4A6NEF3 574 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 PSMD12O00232 456 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 KPNA3O00505 521 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAAR5O14804 337 aa2.92□□□□□ -1.94
HMGB1P38-201ENST00000490557 CD5LO43866 347 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms