RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNRF4Q8WWF5 429 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 PIGCQ92535 297 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 KCTD7Q96MP8 289 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 FN3KQ9H479 309 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 THAP1Q9NVV9 213 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 RHCGQ9UBD6 479 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 DNAJB9Q9UBS3 223 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 OR14J1Q9UGF5 321 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF580Q9UK33 172 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC22A13Q9Y226 551 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 SNX13Q9Y5W8 968 aa5.4□□□□□ -1.54
PDLIM1-203ENST00000490391 IGHV4OR15-8A0A075B7B6 117 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 A0A087WW49 117 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 TLDC2A0PJX2 215 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 TVP23AA6NH52 213 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 ZNF878C9JN71 531 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 LINC01619G3V211 115 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 J3KTA2 159 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HLA-DQA2P01906 255 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 IGF1P05019 195 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 ANXA2P07355 339 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HIST1H1CP16403 213 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 PPIFP30405 207 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 ERVK11-1P61568 191 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 PITPNAQ00169 270 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 STX3Q13277 289 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 EBI3Q14213 229 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HES1Q14469 280 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 TRAM2Q15035 370 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 CEACAM21Q3KPI0 293 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 FGD3Q5JSP0 725 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 CEP78Q5JTW2 689 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 PRAMEF5Q5TYX0 476 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HEPN1Q6WQI6 88 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HDXQ7Z353 690 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 PGAM4Q8N0Y7 254 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 BATF2Q8N1L9 274 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 Q8N9W7 124 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 OR4K13Q8NH42 304 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 UBLCP1Q8WVY7 318 aaPredicted RBP5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 CREB3L1Q96BA8 519 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 OR4C12Q96R67 309 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 MNTQ99583 582 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 HSPB9Q9BQS6 159 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 PARD6BQ9BYG5 372 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 NDEL1Q9GZM8 345 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 TOLLIPQ9H0E2 274 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 CENPMQ9NSP4 180 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 LIN7CQ9NUP9 197 aaKnown RBP5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 SIGLEC8Q9NYZ4 499 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 STUB1Q9UNE7 303 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 COMMD3-BMI1R4GMX3 469 aa5.39□□□□□ -1.55
PDLIM1-203ENST00000490391 A0A087X0M5 115 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 A0A1B0GX30 115 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 OR5B21A6NL26 309 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ARPC3O15145 178 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RTL8CO15255 209 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 SNNO75324 88 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 NXPH2O95156 264 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RENP00797 406 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 SERPINA1P01009 418 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 IGKV1D-33P01593 117 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 IGKV1-33P01594 117 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 KITP10721 976 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ZNF20P17024 532 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 VDAC1P21796 283 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 CDK2P24941 298 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 YAP1P46937 504 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RPS6KA3P51812 740 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ZNF121P58317 390 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ZP1P60852 638 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 DIAPH2-AS1Q14236 149 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 EDDM3AQ14507 147 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 TAF13Q15543 124 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 WHAMMP3Q1A5X7 153 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 OR52W1Q6IF63 320 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ZNF730Q6ZMV8 503 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 IFT20Q8IY31 132 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 TIGD4Q8IY51 512 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 MAPKAPK5-AS1Q8N8E1 139 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RSRC1Q96IZ7 334 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 ERMAPQ96PL5 475 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 CGREF1Q99674 301 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 OVOL2Q9BRP0 275 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 NSRP1Q9H0G5 558 aaKnown RBP5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 OR10A2Q9H208 303 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 RGCCQ9H4X1 137 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 VIPAS39Q9H9C1 493 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 PLEKHA3Q9HB20 300 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 PLSCR3Q9NRY6 295 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 CCDC167Q9P0B6 97 aa5.38□□□□□ -1.55
PDLIM1-203ENST00000490391 A0A0J9YWU9 116 aa5.37□□□□□ -1.55
PDLIM1-203ENST00000490391 DHRS12A0PJE2 317 aa5.37□□□□□ -1.55
PDLIM1-203ENST00000490391 SHISA3A0PJX4 238 aa5.37□□□□□ -1.55
PDLIM1-203ENST00000490391 FAM90A10PA6NDY2 464 aa5.37□□□□□ -1.55
PDLIM1-203ENST00000490391 PRSS29PA6NIE9 313 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms