RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PDZK1IP1Q13113 114 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 MED21Q13503 144 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 EDDM3AQ14507 147 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 ZNF273Q14593 569 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 LRRC36Q1X8D7 754 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 TTC23Q5W5X9 447 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 SERPINA12Q8IW75 414 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 BEND2Q8NDZ0 799 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 SETD9Q8NE22 299 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 OR10AC1Q8NH08 325 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 CYGBQ8WWM9 190 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 SEBOXQ9HB31 216 aaPredicted RBP14.25□□□□□ -0.13
SEC13-218ENST00000490283 RBFOX1Q9NWB1 397 aaKnown RBP14.25□□□□□ -0.13
SEC13-218ENST00000490283 hADV38S2A0JD32 116 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 ZNF737O75373 536 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 COX7A1P24310 79 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 DCKP27707 260 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 SNU13P55769 128 aaKnown RBP14.24□□□□□ -0.13
SEC13-218ENST00000490283 MEF2CQ06413 473 aaPredicted RBP14.24□□□□□ -0.13
SEC13-218ENST00000490283 GRK1Q15835 563 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 TAF9Q16594 264 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 TMPRSS11AQ6ZMR5 421 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 PACRGLQ8N7B6 248 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 OR13D1Q8NGV5 346 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 APH1BQ8WW43 257 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 RHOFQ9HBH0 211 aa14.24□□□□□ -0.13
SEC13-218ENST00000490283 SH2D1BO14796 132 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 MAGEB3O15480 346 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 SULT1B1O43704 296 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZFPL1O95159 310 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 RBP4P02753 201 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZNF728P0DKX0 622 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 MYL12AP19105 171 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 TGFBR2P37173 567 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 NPBWR2P48146 333 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 RELBQ01201 579 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZNF146Q15072 292 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 RCN1Q15293 331 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 HCP5Q6MZN7 132 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZNF782Q6ZMW2 699 aaPredicted RBP14.23□□□□□ -0.13
SEC13-218ENST00000490283 OR5D18Q8NGL1 313 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZNF714Q96N38 554 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 JAM3Q9BX67 310 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 ZNF696Q9H7X3 374 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 FGF20Q9NP95 211 aaPredicted RBP14.23□□□□□ -0.13
SEC13-218ENST00000490283 EXOSC4Q9NPD3 245 aaKnown RBP14.23□□□□□ -0.13
SEC13-218ENST00000490283 CHCHD3Q9NX63 227 aaKnown RBP14.23□□□□□ -0.13
SEC13-218ENST00000490283 GSTK1Q9Y2Q3 226 aa14.23□□□□□ -0.13
SEC13-218ENST00000490283 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 C17orf98A8MV24 154 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 H3BUX3 64 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 CD2P06729 351 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 DUSP1P28562 367 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 SMN1Q16637 294 aaKnown RBP14.22□□□□□ -0.13
SEC13-218ENST00000490283 LRRC75BQ2VPJ9 315 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 ZNF691Q5VV52 312 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 BRICD5Q6PL45 260 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 SAXO1Q8IYX7 474 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 DHRSXQ8N5I4 330 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 WFDC12Q8WWY7 111 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 SPACA5Q96QH8 159 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 SSX3Q99909 188 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 PDCD1LG2Q9BQ51 273 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 CHST6Q9GZX3 395 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 HMG20AQ9NP66 347 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.22□□□□□ -0.13
SEC13-218ENST00000490283 IL36RNQ9UBH0 155 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 RNF114Q9Y508 228 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 LINC00312Q9Y6C7 94 aa14.22□□□□□ -0.13
SEC13-218ENST00000490283 TMEM82A0PJX8 343 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 E9PI62 339 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 SIRPB1O00241 398 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 MGST3O14880 152 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 WBP4O75554 376 aaKnown RBP14.21□□□□□ -0.13
SEC13-218ENST00000490283 KDM4BO94953 1096 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 ALX3O95076 343 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 LIMS3P0CW19 117 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 LIMS4P0CW20 117 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 TMEM225BP0DP42 221 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 CALCBP10092 127 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 RAB3AP20336 220 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 BMXP51813 675 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 AANATQ16613 207 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 CCDC58Q4VC31 144 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 PRR31Q5SQ13 230 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 RPL22L1Q6P5R6 122 aaKnown RBP14.21□□□□□ -0.13
SEC13-218ENST00000490283 TRAPPC6BQ86SZ2 158 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 C11orf42Q8N5U0 333 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 PARP16Q8N5Y8 322 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 CNIH3Q8TBE1 160 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 FOXRED1Q96CU9 486 aaPredicted RBP14.21□□□□□ -0.13
SEC13-218ENST00000490283 ZNF649Q9BS31 505 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 MEGF9Q9H1U4 602 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 RAB18Q9NP72 206 aa14.21□□□□□ -0.13
SEC13-218ENST00000490283 EXOSC1Q9Y3B2 195 aaKnown RBP14.21□□□□□ -0.13
SEC13-218ENST00000490283 CLIC3O95833 236 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 ARG1P05089 322 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 IGHV1-8P0DP01 117 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 ZNF44P15621 663 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms