RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SNX22Q96L94 193 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 CNBD2Q96M20 576 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 GPER1Q99527 375 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 PAK1IP1Q9NWT1 392 aaPredicted RBP14.29□□□□□ -0.12
MDC1-206ENST00000489540 CKLFQ9UBR5 152 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 CUBNO60494 3623 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 IGKV1-12A0A0C4DH73 117 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 CENPVL3A0A0U1RRI6 287 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 PNMA8CA0A1B0GUJ8 204 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 RGS10O43665 173 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 GPX5O75715 221 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 HAND1O96004 215 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 IGKV1D-12P01611 117 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 CRHBPP24387 322 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 BMXP51813 675 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 ZP1P60852 638 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 RPL31P62899 125 aaKnown RBP14.28□□□□□ -0.12
MDC1-206ENST00000489540 IRF3Q14653 427 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 ASPHD2Q6ICH7 369 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 CRIP3Q6Q6R5 217 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 RNF144BQ7Z419 303 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 VMO1Q7Z5L0 202 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 ASCC1Q8N9N2 400 aaKnown RBP14.28□□□□□ -0.12
MDC1-206ENST00000489540 PXT1Q8NFP0 134 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 OR51A2Q8NGJ7 313 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 OR13C5Q8NGS8 318 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 THRSPQ92748 146 aa14.28□□□□□ -0.12
MDC1-206ENST00000489540 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
MDC1-206ENST00000489540 SH2D1BO14796 132 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 ZNF737O75373 536 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 RGS9O75916 674 aaPredicted RBP14.27□□□□□ -0.12
MDC1-206ENST00000489540 BDKRB2P30411 391 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 SRSF2Q01130 221 aaKnown RBP14.27□□□□□ -0.12
MDC1-206ENST00000489540 KRTAP24-1Q3LI83 254 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 RBM48Q5RL73 367 aaKnown RBP14.27□□□□□ -0.12
MDC1-206ENST00000489540 METAP1DQ6UB28 335 aaPredicted RBP14.27□□□□□ -0.12
MDC1-206ENST00000489540 FAM185AQ8N0U4 392 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 SIGLECL1Q8N7X8 197 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 SGCDQ92629 289 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 LHX4Q969G2 390 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 Q9H521 79 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 METTL8Q9H825 291 aaKnown RBP14.27□□□□□ -0.12
MDC1-206ENST00000489540 BLOC1S6Q9UL45 172 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 GSTK1Q9Y2Q3 226 aa14.27□□□□□ -0.12
MDC1-206ENST00000489540 MXRA5Q9NR99 2828 aa14.27□□□□□ -0.13
MDC1-206ENST00000489540 TRBV5-7A0A0A0MS05 114 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 IGHV1-69DA0A0B4J2H0 117 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 TRIM77I1YAP6 450 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 IGHV1-69P01742 117 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 IGFBP3P17936 291 aaPredicted RBP14.26□□□□□ -0.13
MDC1-206ENST00000489540 TGFBR2P37173 567 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 GPR50Q13585 617 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 MED22Q15528 200 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 TMEM200BQ69YZ2 307 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 PRSS48Q7RTY5 328 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 MS4A15Q8N5U1 240 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 Q8N7P7 452 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 PPP1R35Q8TAP8 253 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 TNFAIP8L1Q8WVP5 186 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
MDC1-206ENST00000489540 C19orf12Q9NSK7 152 aa14.26□□□□□ -0.13
MDC1-206ENST00000489540 LSM2Q9Y333 95 aaKnown RBP14.26□□□□□ -0.13
MDC1-206ENST00000489540 hCG_1809904A0A1W2PP81 198 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 A0A1W2PPE2 198 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 A0A1W2PR64 198 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 A0A1W2PRV1 198 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 CALCBP10092 127 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 FSTP19883 344 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 PRTN3P24158 256 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 MAPK3P27361 379 aaPredicted RBP14.25□□□□□ -0.13
MDC1-206ENST00000489540 DUSP1P28562 367 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 ZNF93P35789 620 aaPredicted RBP14.25□□□□□ -0.13
MDC1-206ENST00000489540 PTGFRP43088 359 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 MTNR1BP49286 362 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 GUCA2AQ02747 115 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 DDI2Q5TDH0 399 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 ELP2Q6IA86 826 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 ASCL4Q6XD76 172 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 BRD3OSQ6XYD6 125 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 C17orf107Q6ZR85 190 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 GDPD3Q7L5L3 318 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 OR4M1Q8NGD0 313 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 SPATA3Q8NHX4 192 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 OR14A2Q96R54 314 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 ZNF184Q99676 751 aaPredicted RBP14.25□□□□□ -0.13
MDC1-206ENST00000489540 CCDC90BQ9GZT6 254 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 EXOSC4Q9NPD3 245 aaKnown RBP14.25□□□□□ -0.13
MDC1-206ENST00000489540 IL36RNQ9UBH0 155 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 FOXJ3Q9UPW0 622 aa14.25□□□□□ -0.13
MDC1-206ENST00000489540 TMEM82A0PJX8 343 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 GABRPO00591 440 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 GABRR1P24046 479 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 LMO1P25800 156 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 DOC2BQ14184 412 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 RSU1Q15404 277 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms