RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TNFRSF1AP19438 455 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 GLRA1P23415 457 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 DEFA1P59665 94 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 DEFA3P59666 94 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 GNG2P59768 71 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 IKZF1Q13422 519 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 OLFML2AQ68BL7 652 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 ZNF57Q68EA5 555 aaPredicted RBP17.62■□□□□ 0.41
SND1-214ENST00000489417 FIP1L1Q6UN15 594 aaKnown RBP17.62■□□□□ 0.41
SND1-214ENST00000489417 C6orf201Q7Z4U5 140 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 ST8SIA4Q92187 359 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 GCM1Q9NP62 436 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 FAIMQ9NVQ4 179 aa17.62■□□□□ 0.41
SND1-214ENST00000489417 PLCE1Q9P212 2302 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 LINC00854A0A1B0GVQ3 168 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 A0A1W2PPR1 153 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 SERPINE3A8MV23 424 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 H3BUI4 141 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 H7C417 338 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 WNT9BO14905 357 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 ORC5O43913 435 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 FUT3P21217 361 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 DUSP1P28562 367 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 ACP7Q6ZNF0 438 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 POC5Q8NA72 575 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 OR11L1Q8NGX0 322 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 SETD6Q8TBK2 473 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 Q8TCH9 128 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 NUDCD2Q8WVJ2 157 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 CYYR1Q96J86 154 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 DECR2Q9NUI1 292 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 KLK11Q9UBX7 282 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 MTFP1Q9UDX5 166 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 TBC1D24Q9ULP9 559 aa17.61■□□□□ 0.41
SND1-214ENST00000489417 SRRM5B3KS81 715 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 CA11O75493 328 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 RBBP9O75884 186 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 EGR1P18146 543 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 PPOXP50336 477 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 SSBP1Q04837 148 aaKnown RBP17.6■□□□□ 0.41
SND1-214ENST00000489417 ARFRP1Q13795 201 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 RGS21Q2M5E4 152 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 SPIN3Q5JUX0 258 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 ATAD3CQ5T2N8 411 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 AGAP6Q5VW22 663 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 TRAPPC6BQ86SZ2 158 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 TOMM5Q8N4H5 51 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 WDR13Q9H1Z4 485 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 SAP30LQ9HAJ7 183 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 CBLN4Q9NTU7 201 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 RASL12Q9NYN1 266 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 FBXO9Q9UK97 447 aaPredicted RBP17.6■□□□□ 0.41
SND1-214ENST00000489417 PPP1R3CQ9UQK1 317 aa17.6■□□□□ 0.41
SND1-214ENST00000489417 UBR5O95071 2799 aaPredicted RBP17.59■□□□□ 0.41
SND1-214ENST00000489417 CLEC18AA5D8T8 446 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 MEIS3P1A6NDR6 274 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 SSX5O60225 188 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 GSTT2BP0CG30 244 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 ASAH1Q13510 395 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 ZNF146Q15072 292 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 SMIM21Q3B7S5 101 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 CLEC18BQ6UXF7 455 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 GCSAMQ8N6F7 178 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 CLEC18CQ8NCF0 446 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 SULT4A1Q9BR01 284 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 FAAP24Q9BTP7 215 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 IFT22Q9H7X7 185 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 SPACA1Q9HBV2 294 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 RCC2Q9P258 522 aaKnown RBP17.59■□□□□ 0.41
SND1-214ENST00000489417 RNF7Q9UBF6 113 aa17.59■□□□□ 0.41
SND1-214ENST00000489417 J3QKU1 62 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 PLA2G10O15496 165 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 KNG1P01042 644 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 ACTBP60709 375 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 ACTG1P63261 375 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 HOXA4Q00056 320 aaPredicted RBP17.58■□□□□ 0.41
SND1-214ENST00000489417 C11orf71Q6IPW1 123 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 Q6P435 159 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 BOLLQ8N9W6 283 aaKnown RBP17.58■□□□□ 0.41
SND1-214ENST00000489417 UBTD1Q9HAC8 227 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 GLS2Q9UI32 602 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 PLEKHA6Q9Y2H5 1048 aa17.58■□□□□ 0.41
SND1-214ENST00000489417 FAM208BQ5VWN6 2430 aa17.58■□□□□ 0.4
SND1-214ENST00000489417 SPTBN1Q01082 2364 aaKnown RBP17.58■□□□□ 0.4
SND1-214ENST00000489417 SH2D1BO14796 132 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 DEGS1O15121 323 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 ECDO95905 644 aaPredicted RBP17.57■□□□□ 0.4
SND1-214ENST00000489417 LHBP01229 141 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 CD8AP01732 235 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 DANCRP0C864 163 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 IRF2P14316 349 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 ZNF44P15621 663 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 RBMXP38159 391 aaKnown RBP17.57■□□□□ 0.4
SND1-214ENST00000489417 AP3S2P59780 193 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 KLF9Q13886 244 aaPredicted RBP17.57■□□□□ 0.4
SND1-214ENST00000489417 BRICD5Q6PL45 260 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 DTX2Q86UW9 622 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 FAM90A1Q86YD7 464 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 HPS1Q92902 700 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 AK3Q9UIJ7 227 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms