RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 MMP23AO75900 390 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 DNAJC8O75937 253 aaPredicted RBP9.93□□□□□ -0.82
CPSF3-204ENST00000489403 ALDOBP05062 364 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 KRT8P05787 483 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 CD33P20138 364 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 GABRR1P24046 479 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 AZGP1P25311 298 aaKnown RBP9.93□□□□□ -0.82
CPSF3-204ENST00000489403 PEX2P28328 305 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 ZNF91Q05481 1191 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 GRK1Q15835 563 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 EGFL6Q8IUX8 553 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 GID4Q8IVV7 300 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 WFDC9Q8NEX5 89 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 OR4P4Q8NGL7 312 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 UTP4Q969X6 686 aaKnown RBP9.93□□□□□ -0.82
CPSF3-204ENST00000489403 BORCS8Q96FH0 119 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 IL4I1Q96RQ9 567 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 CLEC7AQ9BXN2 247 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 SEBOXQ9HB31 216 aaPredicted RBP9.93□□□□□ -0.82
CPSF3-204ENST00000489403 KRT84Q9NSB2 600 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 RBFOX1Q9NWB1 397 aaKnown RBP9.93□□□□□ -0.82
CPSF3-204ENST00000489403 POMPQ9Y244 141 aa9.93□□□□□ -0.82
CPSF3-204ENST00000489403 NOTCH3Q9UM47 2321 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 A0A1W2PQL4 384 aaPredicted RBP9.92□□□□□ -0.82
CPSF3-204ENST00000489403 APOL3O95236 402 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 HTR1DP28221 377 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 DUSP1P28562 367 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 NPBWR2P48146 333 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 DNAL1Q4LDG9 190 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 TCTEX1D4Q5JR98 221 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 BAIAP2L2Q6UXY1 529 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 ZBTB49Q6ZSB9 765 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 Q8IYB0 196 aa9.92□□□□□ -0.82
CPSF3-204ENST00000489403 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
CPSF3-204ENST00000489403 TRBV2A0A0J9YWF9 115 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 LOC107986453A0A1B0GWG9 222 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 MGST3O14880 152 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 GYG2O15488 501 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 ENTPD6O75354 484 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 MPIG6BO95866 241 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 OR2T7P0C7T2 308 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 CALCBP10092 127 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 PF4V1P10720 104 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 BCL3P20749 454 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 CD24P25063 80 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 OR3A1P47881 315 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 SNU13P55769 128 aaKnown RBP9.91□□□□□ -0.82
CPSF3-204ENST00000489403 IL18R1Q13478 541 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 ZNF146Q15072 292 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 KDM4DQ6B0I6 523 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 C16orf82Q7Z2V1 217 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 ENTHD1Q8IYW4 607 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 FAM58AQ8N1B3 248 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 PRSS35Q8N3Z0 413 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 CCDC54Q8NEL0 328 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 SLC7A6OSQ96CW6 309 aaPredicted RBP9.91□□□□□ -0.82
CPSF3-204ENST00000489403 C10orf35Q96D05 121 aa9.91□□□□□ -0.82
CPSF3-204ENST00000489403 WARS2Q9UGM6 360 aaKnown RBP9.91□□□□□ -0.82
CPSF3-204ENST00000489403 UBE2J1Q9Y385 318 aaPredicted RBP9.91□□□□□ -0.82
CPSF3-204ENST00000489403 IGKV1-9A0A0C4DH69 117 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 K7EIL1 84 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 SULT1C4O75897 302 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 SERPINA3P01011 423 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 PF4P02776 101 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 LPLP06858 475 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 PRKACAP17612 351 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 ERP29P30040 261 aaKnown RBP9.9□□□□□ -0.82
CPSF3-204ENST00000489403 HTR1FP30939 366 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 KIR3DL2P43630 455 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 POU3F4P49335 361 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 RBP2P50120 134 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 ATP1B3P54709 279 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 P2RX3P56373 397 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 PRAMEF5Q5TYX0 476 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 CCDC121Q6ZUS5 278 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.82
CPSF3-204ENST00000489403 TRAPPC6BQ86SZ2 158 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 RDH10Q8IZV5 341 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 ABHD12Q8N2K0 398 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 DNAAF1Q8NEP3 725 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 OR10H4Q8NGA5 316 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 PP6455Q8WZ26 134 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 MYDGFQ969H8 173 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 ADAT3Q96EY9 351 aaPredicted RBP9.9□□□□□ -0.82
CPSF3-204ENST00000489403 ADI1Q9BV57 179 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 LIN7BQ9HAP6 207 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 DPM3Q9P2X0 92 aa9.9□□□□□ -0.82
CPSF3-204ENST00000489403 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
CPSF3-204ENST00000489403 TCRBV4S1A1TA0A5B7 111 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 FAM172BPA6NC97 362 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 SH2D7A6NKC9 451 aaPredicted RBP9.89□□□□□ -0.83
CPSF3-204ENST00000489403 G3V2T6 193 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 H3BUI4 141 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 SIRPB1O00241 398 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 IGLV1-47P01700 117 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 UBCP0CG48 685 aaKnown RBP9.89□□□□□ -0.83
CPSF3-204ENST00000489403 CDK2P24941 298 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 GDNFP39905 211 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms