RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NPBWR2P48146 333 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 AQP4P55087 323 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 EDDM3BP56851 147 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 KISS1Q15726 138 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 OR4M1Q8NGD0 313 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 OR5D18Q8NGL1 313 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 MYDGFQ969H8 173 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-218ENST00000489037 C19orf12Q9NSK7 152 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 RBFOX1Q9NWB1 397 aaKnown RBP11.74□□□□□ -0.53
BRCA1-218ENST00000489037 SOX21Q9Y651 276 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-218ENST00000489037 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 CLDN34H7C241 214 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 GABRR1P24046 479 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 BMXP51813 675 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 SNU13P55769 128 aaKnown RBP11.73□□□□□ -0.53
BRCA1-218ENST00000489037 WNT4P56705 351 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 C6orf141Q5SZD1 244 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 XAF1Q6GPH4 301 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 OR8H2Q8N162 312 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 Q8N7P7 452 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 RPS4Y2Q8TD47 263 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 GHSRQ92847 366 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM106AQ96A25 262 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 PRDM13Q9H4Q3 707 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 HEXA-AS1Q9H8Q6 139 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 HMG20AQ9NP66 347 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 EXOSC4Q9NPD3 245 aaKnown RBP11.73□□□□□ -0.53
BRCA1-218ENST00000489037 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 TAS2R4Q9NYW5 299 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 CKLFQ9UBR5 152 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 GSTK1Q9Y2Q3 226 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 SF3B6Q9Y3B4 125 aaKnown RBP11.73□□□□□ -0.53
BRCA1-218ENST00000489037 TPRKBQ9Y3C4 175 aa11.73□□□□□ -0.53
BRCA1-218ENST00000489037 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM89A2RUT3 159 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 PTGES3LE9PB15 166 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 NPFFO15130 113 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 KDM4BO94953 1096 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 RNASE1P07998 156 aaKnown RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 CALCBP10092 127 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 DUSP1P28562 367 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 C21orf33P30042 268 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 HSPA13P48723 471 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 UBE2E1P51965 193 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 ZNF146Q15072 292 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 SLC9A3R2Q15599 337 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 GRK1Q15835 563 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 LAIR2Q6ISS4 152 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 Q6YL49 198 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 NRG4Q8WWG1 115 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 RGP1Q92546 391 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 S100A13Q99584 98 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
BRCA1-218ENST00000489037 UNKLQ9H9P5 680 aaKnown RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 SIRT4Q9Y6E7 314 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 hADV38S2A0JD32 116 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 HAX1O00165 279 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 MGST3O14880 152 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 ZNF737O75373 536 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 PAHP00439 452 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 LALBAP00709 142 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 ALDOBP05062 364 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 CRYBA1P05813 215 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 CDK1P06493 297 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 FBP1P09467 338 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 ZNF44P15621 663 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 BDKRB2P30411 391 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 MTNR1BP49286 362 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-218ENST00000489037 SCN1BQ07699 218 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 ACSM1Q08AH1 577 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 FOXL1Q12952 345 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 Q499Y3 187 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 C16orf87Q6PH81 154 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM86BQ8N661 226 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 PXT1Q8NFP0 134 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 TNFAIP8L1Q8WVP5 186 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 SSMEM1Q8WWF3 244 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 THRSPQ92748 146 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 MND1Q9BWT6 205 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 DPAGT1Q9H3H5 408 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM138Q9NPI0 162 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms