RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 I3L521 148 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 K7EN84 100 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 M0QZK8 103 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CDC7O00311 574 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PHYHO14832 338 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RAD51CO43502 376 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 EDF1O60869 148 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 SS18L1O75177 396 aaPredicted RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 MPDU1O75352 247 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 POP7O75817 140 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 KCNK2O95069 426 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RCBTB2O95199 551 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CLIC3O95833 236 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PTTG1O95997 202 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 GYPCP04921 128 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 FGF1P05230 155 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 C2P06681 752 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RHOCP08134 193 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 SERPINA6P08185 405 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 LINC00614P0C842 121 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L2P0CJ85 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L3P0CJ86 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L5P0CJ88 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L6P0CJ89 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L7P0CJ90 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PET100P0DJ07 73 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 SMIM10L1P0DMW3 83 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 IL7P13232 177 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 OR1E1P30953 314 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CEACAM6P40199 344 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RFC3P40938 356 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RBM34P42696 430 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 CDKN2CP42773 168 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PSMD8P48556 350 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 AKR1D1P51857 326 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 NDUFA8P51970 172 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 SUB1P53999 127 aaKnown RBP eCLIP2.36□□□□□ -2.03
SSR1-209ENST00000488834 FBXW4P57775 412 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ACTA2P62736 377 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ACTC1P68032 377 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PITPNAQ00169 270 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DEFA6Q01524 100 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 GNA12Q03113 381 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 C2orf80Q0P641 193 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 BTN1A1Q13410 526 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PRPSAP1Q14558 356 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 PDK2Q15119 407 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 OR4D1Q15615 310 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 GRK1Q15835 563 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ATP6V1FQ16864 119 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ZNF181Q2M3W8 571 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 HSD17B12Q53GQ0 312 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CLLU1Q5K131 121 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DNLZQ5SXM8 178 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 LPCAT4Q643R3 524 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 TRIM40Q6P9F5 258 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DCUN1D2Q6PH85 259 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 H2AFVQ71UI9 128 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ABHD13Q7L211 337 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 GALNT10Q86SR1 603 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 SLC13A5Q86YT5 568 aaPredicted RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 PACRGLQ8N7B6 248 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 TMEM35BQ8NCS4 154 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 VN1R2Q8NFZ6 395 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 OR1M1Q8NGA1 313 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ZNF502Q8TBZ5 544 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ZNF721Q8TF20 911 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DNAJB3Q8WWF6 145 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 GEMIN6Q8WXD5 167 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MAFIPQ8WZ33 124 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 FGF14Q92915 247 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 EXOSC8Q96B26 276 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 TCEAL4Q96EI5 215 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MED8Q96G25 268 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DCUN1D1Q96GG9 259 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 SMIM10Q96HG1 83 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CNBD2Q96M20 576 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RNF145Q96MT1 663 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RILPQ96NA2 401 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ZFP3Q96NJ6 502 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 OR5B12Q96R08 314 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 KCTD14Q9BQ13 255 aaPredicted RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 TCEAL7Q9BRU2 100 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 TIMM29Q9BSF4 260 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DCUN1D5Q9BTE7 237 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MND1Q9BWT6 205 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 CHRNA10Q9GZZ6 450 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DEFB127Q9H1M4 99 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MIXL1Q9H2W2 232 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 METTL8Q9H825 291 aaKnown RBP2.36□□□□□ -2.03
SSR1-209ENST00000488834 WDR54Q9H977 334 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ASCL3Q9NQ33 180 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 MED9Q9NWA0 146 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 TMEM216Q9P0N5 145 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 DUX4Q9UBX2 424 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 RNF11Q9Y3C5 154 aa2.36□□□□□ -2.03
SSR1-209ENST00000488834 ATP10BO94823 1461 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms