RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 HSMCR30P0CW71 290 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 ZNF93P35789 620 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-207ENST00000488591 TGFBR2P37173 567 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 BMXP51813 675 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 BPIFB3P59826 476 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 COL10A1Q03692 680 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 GPR50Q13585 617 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 BLMHQ13867 455 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 KLF17Q5JT82 389 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-207ENST00000488591 DDI2Q5TDH0 399 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 KIR3DL3Q8N743 410 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 PXT1Q8NFP0 134 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 OR51A2Q8NGJ7 313 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 OR5D13Q8NGL4 314 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 TNFAIP8L1Q8WVP5 186 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 UFD1Q92890 307 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 S100A13Q99584 98 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 FAM192AQ9GZU8 254 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-207ENST00000488591 HMG20AQ9NP66 347 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
CXCL12-207ENST00000488591 LSM2Q9Y333 95 aaKnown RBP12.43□□□□□ -0.42
CXCL12-207ENST00000488591 TRBV5-7A0A0A0MS05 114 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 IGKV1-12A0A0C4DH73 117 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 GABRPO00591 440 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 IGKV1D-12P01611 117 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 SFTPBP07988 381 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 CALCBP10092 127 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-207ENST00000488591 FSTP19883 344 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 SNU13P55769 128 aaKnown RBP12.42□□□□□ -0.42
CXCL12-207ENST00000488591 ZP1P60852 638 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 RPL31P62899 125 aaKnown RBP12.42□□□□□ -0.42
CXCL12-207ENST00000488591 ZNF146Q15072 292 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 ASPHD2Q6ICH7 369 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 RBMS3Q6XE24 437 aaKnown RBP12.42□□□□□ -0.42
CXCL12-207ENST00000488591 RNF144BQ7Z419 303 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 FAM185AQ8N0U4 392 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 PPP1R35Q8TAP8 253 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 SNX22Q96L94 193 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 DERL3Q96Q80 235 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 SIRPDQ9H106 197 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 EXOSC4Q9NPD3 245 aaKnown RBP12.42□□□□□ -0.42
CXCL12-207ENST00000488591 ZNF69Q9UC07 566 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 ING4Q9UNL4 249 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 FOXJ3Q9UPW0 622 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 GSTK1Q9Y2Q3 226 aa12.42□□□□□ -0.42
CXCL12-207ENST00000488591 SVEP1Q4LDE5 3571 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 MRPS14O60783 128 aaKnown RBP12.41□□□□□ -0.42
CXCL12-207ENST00000488591 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 MMP9P14780 707 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 DUSP1P28562 367 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 PTGFRP43088 359 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 MTNR1BP49286 362 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 DOC2BQ14184 412 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 RSU1Q15404 277 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 CRIP3Q6Q6R5 217 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 C1orf122Q6ZSJ8 110 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 USP43Q70EL4 1123 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 C22orf15Q8WYQ4 148 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 ORAI1Q96D31 301 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 TBX15Q96SF7 602 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 TMED9Q9BVK6 235 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 YTHDF1Q9BYJ9 559 aaKnown RBP12.41□□□□□ -0.42
CXCL12-207ENST00000488591 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 PCDHB16Q9NRJ7 776 aa12.41□□□□□ -0.42
CXCL12-207ENST00000488591 TRAV8-7A0A075B6U6 113 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 hCG_1809904A0A1W2PP81 198 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 A0A1W2PPE2 198 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 A0A1W2PR64 198 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 A0A1W2PRV1 198 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 M0R1W7 72 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 ZNF737O75373 536 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 GABRR1P24046 479 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 EDDM3BP56851 147 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 SCN1BQ07699 218 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 MLLT11Q13015 90 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-207ENST00000488591 TPBGQ13641 420 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 TRAM1Q15629 374 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 LIPKQ5VXJ0 399 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 ELP2Q6IA86 826 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 OR4M1Q8NGD0 313 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 LHX4Q969G2 390 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 IL36RNQ9UBH0 155 aa12.4□□□□□ -0.42
CXCL12-207ENST00000488591 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
CXCL12-207ENST00000488591 MEGF11A6BM72 1044 aa12.39□□□□□ -0.43
CXCL12-207ENST00000488591 DEGS1O15121 323 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms