RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NT5DC3Q86UY8 548 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 RPS19BP1Q86WX3 136 aaKnown RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 CYP4Z2PQ8N1L4 340 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 TMEM251Q8N6I4 163 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 TTC29Q8NA56 475 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 GATSQ8NAP1 163 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 OR2M7Q8NG81 312 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 OR9A2Q8NGT5 310 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 LRRC58Q96CX6 371 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 SEH1LQ96EE3 360 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 NARS2Q96I59 477 aaKnown RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 CAMK2N2Q96S95 79 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 FMO2Q99518 471 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 TIMM29Q9BSF4 260 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 BPESC1Q9GZL8 116 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 CENPHQ9H3R5 247 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 TRIM45Q9H8W5 580 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 GORASP2Q9H8Y8 452 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 C14orf105Q9NVL8 296 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 DDIT4Q9NX09 232 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 CLEC4AQ9UMR7 237 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 KMT2AQ03164 3969 aa2.34□□□□□ -2.04
ITGB1-214ENST00000488427 CLDN34H7C241 214 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CPLX1O14810 134 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 ERLIN1O75477 346 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 LY6HO94772 140 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 GLSO94925 669 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 MPZL1O95297 269 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 LY6G6CO95867 125 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 IGLV3-25P01717 112 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 DTYMKP23919 212 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CEACAM6P40199 344 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CRYBB2P43320 205 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 GABRA4P48169 554 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 AIF1P55008 147 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 NUTF2P61970 127 aaKnown RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 RPL23AP62750 156 aaKnown RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 MRPS22P82650 360 aaKnown RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 SYCNQ0VAF6 134 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 MAB21L1Q13394 359 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 XRCC4Q13426 336 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 RCAN2Q14206 197 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 TGFBIQ15582 683 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CTSL3PQ5NE16 218 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 PRR9Q5T870 116 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 SPOPLQ6IQ16 392 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 ADNP2Q6IQ32 1131 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 DUX4L9Q6RFH8 374 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 TMEM205Q6UW68 189 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 ZNF720Q7Z2F6 126 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 WDR86Q86TI4 376 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CDKL3Q8IVW4 592 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 PDIK1LQ8N165 341 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 TMEM156Q8N614 296 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 OR4E2Q8NGC2 313 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 OR10R2Q8NGX6 335 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 COQ8AQ8NI60 647 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 L3HYPDHQ96EM0 354 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 C18orf15Q96N68 181 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 PLIN2Q99541 437 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 ULBP2Q9BZM5 246 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 OR2AG1Q9H205 316 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 BLZF1Q9H2G9 400 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 CYP3A43Q9HB55 503 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 SLC23A2Q9UGH3 650 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 NUP50Q9UKX7 468 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 HYOU1Q9Y4L1 999 aa2.33□□□□□ -2.04
ITGB1-214ENST00000488427 NUP214P35658 2090 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-214ENST00000488427 PLECQ15149 4684 aaKnown RBP2.32□□□□□ -2.04
ITGB1-214ENST00000488427 MUC2Q02817 5179 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 A0A0G2JMM0 328 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 A0A1W2PPB8 328 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 A0A1W2PRS3 328 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 KIR3DP1A8MWS1 328 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 C2orf74A8MZ97 194 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 H7C417 338 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 CLPXO76031 633 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 TMEM50AO95807 157 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 TACSTD2P09758 323 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 ATP1B2P14415 290 aaPredicted RBP2.32□□□□□ -2.04
ITGB1-214ENST00000488427 SSR4P51571 173 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 SEC61GP60059 68 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 CYP24A1Q07973 514 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 IL24Q13007 206 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 SLC9A3R2Q15599 337 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 PRMT9Q6P2P2 845 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 C16orf87Q6PH81 154 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 EGFL6Q8IUX8 553 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 LGI3Q8N145 548 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 SPATA4Q8NEY3 305 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 OR4S1Q8NGB4 309 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 OR4F6Q8NGB9 312 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 UBA3Q8TBC4 463 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 GPR151Q8TDV0 419 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 ISOC1Q96CN7 298 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 ECHDC3Q96DC8 303 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 ZYG11BQ9C0D3 744 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 CHRNA10Q9GZZ6 450 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 SPNS1Q9H2V7 528 aa2.32□□□□□ -2.04
ITGB1-214ENST00000488427 KIR3DX1Q9H7L2 352 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms