RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 AP3M1Q9Y2T2 418 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 AQRO60306 1485 aaKnown RBP eCLIP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 A0A1B0GXF2 115 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 GOLGA6L4A6NEF3 574 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 OR2AT4A6NND4 320 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 C9JQL5 133 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 H3BQ85 93 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 C15orf65H3BRN8 121 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 K7EPK0 472 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF593O00488 134 aaPredicted RBP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 GATCO43716 136 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 VAPBO95292 243 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 IGHMP01871 453 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 SNRPAP09012 282 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 CGB3P0DN86 165 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 CGB7P0DN87 165 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 PRPS1L1P21108 318 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 IMPA1P29218 277 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 SLC18A1P54219 525 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 TRDNQ13061 729 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF141Q15928 474 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 TNXAQ16473 311 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 Q499Y3 187 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ACTBL2Q562R1 376 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 PYDC2Q56P42 97 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 AMMECR1LQ6DCA0 310 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF470Q6ECI4 717 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 HCP5Q6MZN7 132 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 FAHD1Q6P587 224 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 TPGS1Q6ZTW0 290 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 LINC00596Q86U02 117 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 MARCH3Q86UD3 253 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 NT5DC3Q86UY8 548 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ZFP82Q8N141 532 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 FAM58AQ8N1B3 248 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 CLHC1Q8NHS4 586 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 MUC7Q8TAX7 377 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ACTL9Q8TC94 416 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 MITD1Q8WV92 249 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 CCL17Q92583 94 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 IGF2BP2-AS1Q96M15 143 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 RILPQ96NA2 401 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 PKMYT1Q99640 499 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 HINT2Q9BX68 163 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 PRORYQ9H606 182 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ASF1BQ9NVP2 202 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 RMND1Q9NWS8 449 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 SDHAF2Q9NX18 166 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 TAC3Q9UHF0 121 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ACOT9Q9Y305 439 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 RBMX2Q9Y388 322 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 BZW2Q9Y6E2 419 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 ICOSQ9Y6W8 199 aa1.27□□□□□ -2.21
R3HDM1-219ENST00000488035 GSTTP1A0A1W2PQM5 241 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF729A6NN14 1252 aaPredicted RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 A8MWP4 228 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 GYG2O15488 501 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 CPSF4O95639 269 aaKnown RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 IGKV1D-33P01593 117 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 IGKV1-33P01594 117 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 IGKV5-2P06315 115 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 DEKP35659 375 aaKnown RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ARR3P36575 388 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 FOXA1P55317 472 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 C2orf80Q0P641 193 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ENDOGQ14249 297 aaKnown RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 GPR176Q14439 515 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 STK38Q15208 465 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 MRPL2Q5T653 305 aaKnown RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 IDNKQ5T6J7 187 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ZFAND6Q6FIF0 208 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 GALNT10Q86SR1 603 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 AMN1Q8IY45 258 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 OR6N2Q8NGY6 317 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ZCCHC13Q8WW36 166 aaKnown RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 CDKL2Q92772 493 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 MAL2Q969L2 176 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 YIPF5Q969M3 257 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF396Q96N95 335 aaPredicted RBP1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 PRRG3Q9BZD7 231 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 SYT4Q9H2B2 425 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 DUSP21Q9H596 190 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 SDHAF3Q9NRP4 125 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 CLEC2DQ9UHP7 191 aa1.26□□□□□ -2.21
R3HDM1-219ENST00000488035 PCNX2A6NKB5 2137 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 DHX57Q6P158 1386 aaKnown RBP1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 IGHV3-43A0A0B4J1X8 118 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 MGAT4DA6NG13 374 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 H3BP45 60 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 TCAPO15273 167 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 COX7A2P2O60397 106 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 BIKQ13323 160 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 RESP18Q5W5W9 173 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 ERICH5Q6P6B1 374 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 ZNF773Q6PK81 442 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 LYPD6Q86Y78 171 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 OR2M3Q8NG83 312 aa1.25□□□□□ -2.21
R3HDM1-219ENST00000488035 OR2AE1Q8NHA4 323 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms