RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 GNPTGQ9UJJ9 305 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ASF1AQ9Y294 204 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 NUP210Q8TEM1 1887 aaPredicted RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 DOCK5Q9H7D0 1870 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 MYO7BQ6PIF6 2116 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 LRP4O75096 1905 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 BAZ2AQ9UIF9 1905 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 MUC2Q02817 5179 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 INTS1Q8N201 2190 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 TRAV8-7A0A075B6U6 113 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 A0A0B4J2A0 478 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GOLGA8JA6NMD2 632 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GOLGA8KD6RF30 607 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SMKR1H3BMG3 65 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GOLGA8MH3BSY2 632 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 DFFAO00273 331 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SULT1C2O00338 296 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ERI3O43414 337 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 HCRTR1O43613 425 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 HPRT1P00492 218 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GCGP01275 180 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 OR8U9P0C7N5 309 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GOLGA8HP0CJ92 632 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 RBMY1CP0DJD4 496 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 RD3LP0DJH9 198 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 IGFBP3P17936 291 aaPredicted RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 CSNK2A2P19784 350 aaPredicted RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 RAB5AP20339 215 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 CEACAM3P40198 252 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ACTR1BP42025 376 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 KIR2DS4P43632 304 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 BIDP55957 195 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 MLF1P58340 268 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 RPL31P62899 125 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 MRPS25P82663 173 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 ZNF92Q03936 586 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 EIF3IQ13347 325 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 TPBGQ13641 420 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 FLOT2Q14254 428 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 GGTLC2Q14390 218 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 C17orf58Q2M2W7 97 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 TMEM249Q2WGJ8 235 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ZNF658Q5TYW1 1059 aaPredicted RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 OR5M10Q6IEU7 315 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 DNM1P46Q6ZS02 220 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 PPP1R27Q86WC6 154 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 HORMAD1Q86X24 394 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 STX12Q86Y82 276 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 TMEM25Q86YD3 366 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 FUNDC1Q8IVP5 155 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 BBS7Q8IWZ6 715 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SKA3Q8IX90 412 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 RDH10Q8IZV5 341 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 METTL13Q8N6R0 699 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 CCDC71LQ8N9Z2 235 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 WDR31Q8NA23 367 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ATP6V1C2Q8NEY4 427 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 OR8U1Q8NH10 309 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 OR51A7Q8NH64 312 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SGMS2Q8NHU3 365 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 MCOLN3Q8TDD5 553 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 RNF133Q8WVZ7 376 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ESR2Q92731 530 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 EEF1AKMT3Q96AZ1 226 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 CMTM5Q96DZ9 223 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 PIK3IP1Q96FE7 263 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 KLHDC3Q9BQ90 382 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 AGMATQ9BSE5 352 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 NXF3Q9H4D5 531 aaKnown RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 WDR55Q9H6Y2 383 aaPredicted RBP2.5□□□□□ -2.01
UBR3-211ENST00000487689 PLSCR3Q9NRY6 295 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SLC39A1Q9NY26 324 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 SHPKQ9UHJ6 478 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 CYB5R1Q9UHQ9 305 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 PRELID1Q9Y255 219 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 CFL2Q9Y281 166 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 ACOT9Q9Y305 439 aa2.5□□□□□ -2.01
UBR3-211ENST00000487689 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 CACNA1CQ13936 2221 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 USF3Q68DE3 2245 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 ZNF816-ZNF321PA0A0X1KG74 233 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 PINLYPA6NC86 204 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 TLCD2A6NGC4 264 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 TVP23AA6NH52 213 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 OR6C70A6NIJ9 312 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 DHRS7CA6NNS2 312 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 K7EN84 100 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 M0QXV9 152 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 ZNF593O00488 134 aaPredicted RBP2.49□□□□□ -2.01
UBR3-211ENST00000487689 SLC16A4O15374 487 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 RCBTB2O95199 551 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 SLC2A10O95528 541 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 APODP05090 189 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 IGHV4-34P06331 123 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 ZNF250P15622 560 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 HLA-GP17693 338 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 IGHV1-2P23083 117 aa2.49□□□□□ -2.01
UBR3-211ENST00000487689 GPR6P46095 362 aaPredicted RBP2.49□□□□□ -2.01
UBR3-211ENST00000487689 HCCSP53701 268 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms