RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 PAX6P26367 422 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 MPLP40238 635 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 OR5M9Q8NGP3 310 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 NEIL1Q96FI4 390 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-206ENST00000487222 SLC52A3Q9NQ40 469 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 RAB7AP51149 207 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 PNRC1Q12796 327 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-206ENST00000487222 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
EPHB4-206ENST00000487222 ETV3LQ6ZN32 361 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 OR10AC1Q8NH08 325 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 OR2T6Q8NHC8 308 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
EPHB4-206ENST00000487222 J3QR89 54 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 SOCS1O15524 211 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 CDC34P49427 236 aaPredicted RBP13□□□□□ -0.33
EPHB4-206ENST00000487222 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
EPHB4-206ENST00000487222 Q3ZCU0 254 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 ZNF766Q5HY98 468 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 NOL4LQ96MY1 436 aaPredicted RBP13□□□□□ -0.33
EPHB4-206ENST00000487222 RBFOX3A6NFN3 312 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 CRYABP02511 175 aaKnown RBP13□□□□□ -0.33
EPHB4-206ENST00000487222 FGF2P09038 288 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 ALKBH6Q3KRA9 238 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 ZAR1Q86SH2 424 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 COL4A1P02462 1669 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.333e-9■□□□□ 10.4
EPHB4-206ENST00000487222 SSPNQ14714 243 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 GPA33Q99795 319 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 IER2Q9BTL4 223 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 TRAV8-7A0A075B6U6 113 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 IFITM3Q01628 133 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 SKP2Q13309 424 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 ASB5Q8WWX0 329 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 VPS25Q9BRG1 176 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 SF3B5Q9BWJ5 86 aaKnown RBP13□□□□□ -0.33
EPHB4-206ENST00000487222 NAT8BQ9UHF3 227 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
EPHB4-206ENST00000487222 TRPM6Q9BX84 2022 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 PATE4P0C8F1 98 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 PMCHP20382 165 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 EIF4EBP2Q13542 120 aaPredicted RBP12.99□□□□□ -0.33
EPHB4-206ENST00000487222 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR10G4Q8NGN3 311 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR10G9Q8NGN4 311 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR10G7Q8NGN6 311 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 PARD6AQ9NPB6 346 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 CABIN1Q9Y6J0 2220 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR2M5A3KFT3 312 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 ZNF250P15622 560 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 VDAC1P21796 283 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 MEOX1P50221 254 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
EPHB4-206ENST00000487222 RHOBP62745 196 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR10AD1Q8NGE0 317 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 STARD10Q9Y365 291 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
EPHB4-206ENST00000487222 C7orf66A4D0T2 115 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 HIST1H3AP68431 136 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 PCOLCE2Q9UKZ9 415 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 LOC102723971A0A1B0GUV8 181 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OPN1MWP04001 364 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OPN1MW2P0DN77 364 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 OPN1MW3P0DN78 364 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
EPHB4-206ENST00000487222 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 GPR27Q9NS67 375 aa12.99□□□□□ -0.33
EPHB4-206ENST00000487222 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 TCRBV16S1A1N1A0A5B0 115 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 DEFB108AA8MXU0 73 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 C19orf57Q0VDD7 668 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 MYPOPQ86VE0 399 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 COL5A3P25940 1745 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 MT-CO3P00414 261 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 KIR2DS2P43631 304 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 MMP16P51512 607 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 COL13A1Q5TAT6 717 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 WDR61Q9GZS3 305 aaKnown RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 ESRP2Q9H6T0 727 aaKnown RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 MYOZ1Q9NP98 299 aaPredicted RBP12.98□□□□□ -0.33
EPHB4-206ENST00000487222 TRGV8A0A0C4DH27 118 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 SYNGR2O43760 224 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 OR3A1P47881 315 aa12.98□□□□□ -0.33
EPHB4-206ENST00000487222 COL19A1Q14993 1142 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms