RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PRRG3Q9BZD7 231 aa15.49■□□□□ 0.07
SMPDL3A-202ENST00000487215 GPR61Q9BZJ8 451 aa15.49■□□□□ 0.07
SMPDL3A-202ENST00000487215 CHST6Q9GZX3 395 aa15.49■□□□□ 0.07
SMPDL3A-202ENST00000487215 SLC25A19Q9HC21 320 aa15.49■□□□□ 0.07
SMPDL3A-202ENST00000487215 IGKV1-27A0A075B6S5 117 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 OR2F2O95006 317 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 INMTO95050 263 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 AMY1AP04745 511 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 AMY2AP04746 511 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 BRS3P32247 399 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 FLOT2Q14254 428 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 SNAPC1Q16533 368 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 ZNF322Q6U7Q0 402 aaPredicted RBP15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 BAIAP2L2Q6UXY1 529 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 ETV3LQ6ZN32 361 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 MRPL41Q8IXM3 137 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 BCAS4Q8TDM0 211 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 STMN2Q93045 179 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 NRBF2Q96F24 287 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 RBM14Q96PK6 669 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 CNN2Q99439 309 aaKnown RBP15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 TVP23BQ9NYZ1 205 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 DPM3Q9P2X0 92 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 IL36RNQ9UBH0 155 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 SLC7A11Q9UPY5 501 aa15.48■□□□□ 0.07
SMPDL3A-202ENST00000487215 GYG2O15488 501 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 PSPNO60542 156 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 HAND1O96004 215 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 GABRR1P24046 479 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 PEX2P28328 305 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 ACTR3P61158 418 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 CBX1P83916 185 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 EGFL6Q8IUX8 553 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 ABHD12Q8N2K0 398 aa15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 EMG1Q92979 244 aaKnown RBP15.47■□□□□ 0.07
SMPDL3A-202ENST00000487215 FKBP6O75344 327 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 CCL1P22362 96 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 PRKACGP22612 351 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 CXCR4P61073 352 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 BDH1Q02338 343 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 UBE2V2Q15819 145 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 PRAMEF5Q5TYX0 476 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 SLX4IPQ5VYV7 408 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 SLC25A26Q70HW3 274 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 TRAPPC6BQ86SZ2 158 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 OSR2Q8N2R0 312 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 ZNF649Q9BS31 505 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 SEBOXQ9HB31 216 aaPredicted RBP15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 PAPOLBQ9NRJ5 636 aaKnown RBP15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 SNX5Q9Y5X3 404 aa15.46■□□□□ 0.07
SMPDL3A-202ENST00000487215 CCDC159P0C7I6 412 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 CRISP1P54107 249 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF91Q05481 1191 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 C9orf152Q5JTZ5 239 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF596Q8TC21 504 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 MNTQ99583 582 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 PLEKHA1Q9HB21 404 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 H2AFY2Q9P0M6 372 aaPredicted RBP15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 MRM2Q9UI43 246 aaKnown RBP15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 HHLA2Q9UM44 414 aa15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 UBE2J1Q9Y385 318 aaPredicted RBP15.45■□□□□ 0.06
SMPDL3A-202ENST00000487215 TCRBV3S1A0A5B6 114 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 FAM172BPA6NC97 362 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 LEUTXA8MZ59 168 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 H3BSH0 61 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 MGST3O14880 152 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 IGLV1-47P01700 117 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 DUSP1P28562 367 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 OR3A1P47881 315 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 THBS3P49746 956 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 FUT6P51993 359 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 ARHGDIBP52566 201 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 P2RX3P56373 397 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 DCTN2Q13561 401 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 ODF4Q2M2E3 257 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 BCDIN3DQ7Z5W3 292 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 RTN4RL2Q86UN3 420 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 SLC35F2Q8IXU6 374 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 OR51D1Q8NGF3 324 aa15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 RBFOX1Q9NWB1 397 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-202ENST00000487215 PSMB11A5LHX3 300 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 PRKYO43930 277 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 CDK2P24941 298 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 ERP29P30040 261 aaKnown RBP15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 OR52W1Q6IF63 320 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 RNF144BQ7Z419 303 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 ENTHD1Q8IYW4 607 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 BORCS8Q96FH0 119 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 MCRIP2Q9BUT9 160 aaKnown RBP15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 CHST5Q9GZS9 411 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 GAL3ST2Q9H3Q3 398 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 ADGRL4Q9HBW9 690 aa15.43■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF670-ZNF695F2Z2N8 137 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 M0QZK8 103 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 GATBO75879 557 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 RPP14O95059 124 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 GDNFP39905 211 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 NPBWR2P48146 333 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 SNU13P55769 128 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 RPL23AP62750 156 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms