RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PPA1Q15181 289 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 OR1J1Q8NGS3 322 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 CA5BP1Q8WTZ4 195 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 RNF122Q9H9V4 155 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 SLC2A9Q9NRM0 540 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 METTL1Q9UBP6 276 aaKnown RBP10.79□□□□□ -0.68
HSPG2-211ENST00000486901 NSG1A0A0A6YYJ2 146 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 LCATP04180 440 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 ATP6V0CP27449 155 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 CSNK1A1P48729 337 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF880Q6PDB4 577 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 CRIP3Q6Q6R5 217 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 FAM131CQ96AQ9 280 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 POM121Q96HA1 1249 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF442Q9H7R0 627 aa10.79□□□□□ -0.68
HSPG2-211ENST00000486901 SEBOXQ9HB31 216 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-211ENST00000486901 A0A1W2PPC4 97 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 SHISA7A6NL88 538 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 IFNA17P01571 189 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 IGHV2-5P01817 119 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 RND3P61587 244 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 DLK1P80370 383 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 SURF2Q15527 256 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF468Q5VIY5 522 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 DEGS2Q6QHC5 323 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 POC1BQ8TC44 478 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 CRLF2Q9HC73 371 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 DOCK10Q96BY6 2186 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 TAAR5O14804 337 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 SOD3P08294 240 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 CHATP28329 748 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 GPX4P36969 197 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 LCN15Q6UWW0 184 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 DOK3Q7L591 496 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 DMRTC2Q8IXT2 367 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 INTS12Q96CB8 462 aaKnown RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 NUDT19A8MXV4 375 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 PPIHO43447 177 aaKnown RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 RNF212Q495C1 297 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 THEM4Q5T1C6 240 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 OR5C1Q8NGR4 320 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 NEK7Q8TDX7 302 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 SCRT1Q9BWW7 348 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 MRPL13Q9BYD1 178 aaKnown RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 FBRSQ9HAH7 460 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 PNRC2Q9NPJ4 139 aaKnown RBP10.78□□□□□ -0.68
HSPG2-211ENST00000486901 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 MMACHCQ9Y4U1 282 aa10.78□□□□□ -0.68
HSPG2-211ENST00000486901 TERTO14746 1132 aaKnown RBP10.77□□□□□ -0.68
HSPG2-211ENST00000486901 HSD17B6O14756 317 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 CCL2P13500 99 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 BMP5P22003 454 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 MPZP25189 248 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 RAB11AP62491 216 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF154Q13106 437 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 MPV17LQ2QL34 196 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.77□□□□□ -0.68
HSPG2-211ENST00000486901 RAET1LQ5VY80 246 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 PRR18Q8N4B5 295 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 TMEM171Q8WVE6 324 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 SNX22Q96L94 193 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 OR51B6Q9H340 312 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 UNKLQ9H9P5 680 aaKnown RBP10.77□□□□□ -0.68
HSPG2-211ENST00000486901 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.68
HSPG2-211ENST00000486901 PRR14LQ5THK1 2151 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 IGKV1-27A0A075B6S5 117 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 CRYM-AS1A6NIL9 109 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 C2CD4DB7Z1M9 353 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 E5RGE8 158 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 IFNL4K9M1U5 179 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ST8SIA3O43173 380 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 RPS18P62269 152 aaKnown RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 EWSR1Q01844 656 aaKnown RBP eCLIP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 WDR25Q64LD2 544 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 PIGCQ92535 297 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ALKBH3Q96Q83 286 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ALKBH4Q9NXW9 302 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 NSG2Q9Y328 171 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 UBE2J1Q9Y385 318 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 IGSF23A1L1A6 192 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ANKUB1A6NFN9 424 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 M0R135 149 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 AADACP22760 399 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 GNRHRP30968 328 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 FAM3AP98173 230 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 USF2Q15853 346 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-211ENST00000486901 OR2T2Q6IF00 324 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ZNF774Q6NX45 483 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 ZNF799Q96GE5 643 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 SSX3Q99909 188 aa10.77□□□□□ -0.69
HSPG2-211ENST00000486901 TWSG1Q9GZX9 223 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms