RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 LTBP2Q14767 1821 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 GP1BAP07359 652 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 NFYBP25208 207 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 BTCP35070 178 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 H2BFSP57053 126 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SSX2Q16385 188 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF239Q16600 458 aaKnown RBP11.55□□□□□ -0.56
HMGN1-216ENST00000486741 C1orf100Q5SVJ3 147 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 OR10AD1Q8NGE0 317 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SULT4A1Q9BR01 284 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 KCNJ16Q9NPI9 418 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 ANXA10Q9UJ72 324 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 CST7O76096 145 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SFT2D2O95562 160 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 CLDN1O95832 211 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 TUBG1P23258 451 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 GNG3P63215 75 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 PTAFRP25105 342 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 OR8G2PQ6IF36 304 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 GPHA2Q96T91 129 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 SLC26A1Q9H2B4 701 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 KIAA1671Q9BY89 1806 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 DIDO1Q9BTC0 2240 aaKnown RBP11.54□□□□□ -0.56
HMGN1-216ENST00000486741 RRASP10301 218 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 CALCRP30988 508 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF83P51522 516 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 UNC119Q13432 240 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-216ENST00000486741 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ERVH48-1M5A8F1 160 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF17P17021 662 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 CD80P33681 288 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
HMGN1-216ENST00000486741 FOXC1Q12948 553 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 OR8B8Q15620 311 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
HMGN1-216ENST00000486741 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ERRFI1Q9UJM3 462 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-216ENST00000486741 ONECUT2O95948 504 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 BCL3P20749 454 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 CLLU1Q5K131 121 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 POLDIP2Q9Y2S7 368 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 BCL2L11O43521 198 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 IGHMP01871 453 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 BMP5P22003 454 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 STPG1Q5TH74 334 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 SLC25A42Q86VD7 318 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 ADAT1Q9BUB4 502 aaKnown RBP11.53□□□□□ -0.56
HMGN1-216ENST00000486741 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 PUS1Q9Y606 427 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGN1-216ENST00000486741 KIAA2026Q5HYC2 2103 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 CDIPTO14735 213 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 CRYAAP02489 173 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 IAPPP10997 89 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 ECI1P42126 302 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 PDZK1IP1Q13113 114 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 DMBX1Q8NFW5 382 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 LRRC46Q96FV0 321 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 TINAGQ9UJW2 476 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 ABCA4P78363 2273 aa11.53□□□□□ -0.56
HMGN1-216ENST00000486741 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-216ENST00000486741 SH2D1BO14796 132 aa11.52□□□□□ -0.56
HMGN1-216ENST00000486741 NGFP01138 241 aa11.52□□□□□ -0.56
HMGN1-216ENST00000486741 ENDOGQ14249 297 aaKnown RBP11.52□□□□□ -0.56
HMGN1-216ENST00000486741 GGNBP1Q5YKI7 109 aa11.52□□□□□ -0.56
HMGN1-216ENST00000486741 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.56
HMGN1-216ENST00000486741 FAM58AQ8N1B3 248 aa11.52□□□□□ -0.56
HMGN1-216ENST00000486741 OR10S1Q8NGN2 331 aa11.52□□□□□ -0.56
HMGN1-216ENST00000486741 GLAP06280 429 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 ZP1P60852 638 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 WFDC8Q8IUA0 241 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 LURAP1Q96LR2 239 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 MRPL13Q9BYD1 178 aaKnown RBP11.52□□□□□ -0.57
HMGN1-216ENST00000486741 COL4A3Q01955 1670 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 DEFB108AA8MXU0 73 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 ZFP62Q8NB50 900 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-216ENST00000486741 DYNLRB1Q9NP97 96 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 DEPPQ9NTK1 212 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 SPRY3O43610 288 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 CASP6P55212 293 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 Q6ZRG5 221 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 CNTNAP3Q9BZ76 1288 aa11.52□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 SPANXN5Q5MJ07 72 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 MDP1Q86V88 176 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 OR2Z1Q8NG97 314 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 TMEM100Q9NV29 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms