RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TAL2Q16559 108 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 SYT6Q5T7P8 510 aaPredicted RBP1.68□□□□□ -2.14
LTN1-206ENST00000486427 OR8A1Q8NGG7 326 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 OR4A15Q8NGL6 344 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 FAM131CQ96AQ9 280 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 PPP1R36Q96LQ0 422 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 SHCBP1LQ9BZQ2 653 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 GAL3ST2Q9H3Q3 398 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 C12orf4Q9NQ89 552 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 RBM22Q9NW64 420 aaKnown RBP eCLIP1.68□□□□□ -2.14
LTN1-206ENST00000486427 AP3M1Q9Y2T2 418 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 ACOT9Q9Y305 439 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 PLXNB3Q9ULL4 1909 aa1.68□□□□□ -2.14
LTN1-206ENST00000486427 SEC14L6B5MCN3 397 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 K7EPK0 472 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 RNF113AO15541 343 aaKnown RBP1.67□□□□□ -2.14
LTN1-206ENST00000486427 OR2A4O95047 310 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 OTCP00480 354 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 PRB1P04280 392 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 LIPCP11150 499 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 IFI30P13284 250 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 CD9P21926 228 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 ENDOGQ14249 297 aaKnown RBP1.67□□□□□ -2.14
LTN1-206ENST00000486427 NDUFAF6Q330K2 333 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 ZNF404Q494X3 552 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 PCOTHQ58A44 107 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 NELFCDQ8IXH7 590 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 RPRMLQ8N4K4 120 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 CCNYL1Q8N7R7 359 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 UBA3Q8TBC4 463 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 OR2A7Q96R45 310 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 MAP1LC3CQ9BXW4 147 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 TSGA10Q9BZW7 698 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 PORCNQ9H237 461 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 SLC38A1Q9H2H9 487 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 TAC3Q9UHF0 121 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 FLVCR2Q9UPI3 526 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 INSIG2Q9Y5U4 225 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 TMEM131Q92545 1883 aa1.67□□□□□ -2.14
LTN1-206ENST00000486427 TRAV8-7A0A075B6U6 113 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 SLC5A10A0PJK1 596 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 OR2AT4A6NND4 320 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 ZNF593O00488 134 aaPredicted RBP1.66□□□□□ -2.14
LTN1-206ENST00000486427 DHRS3O75911 302 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 IGKV1-16P04430 117 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 STAG3L2P0CL84 134 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 PTHLHP12272 177 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 TAC1P20366 129 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 CSRP1P21291 193 aaKnown RBP1.66□□□□□ -2.14
LTN1-206ENST00000486427 HTR2CP28335 458 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 SLC18A1P54219 525 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 SSX1Q16384 188 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 HSP90AA4PQ58FG1 418 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 CLEC12AQ5QGZ9 265 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 IDNKQ5T6J7 187 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 COMTD1Q86VU5 262 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 OR5P3Q8WZ94 311 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 C20orf166-AS1Q96NR2 134 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 PRORYQ9H606 182 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 ANXA10Q9UJ72 324 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 CHTOPQ9Y3Y2 248 aaKnown RBP1.66□□□□□ -2.14
LTN1-206ENST00000486427 ICOSQ9Y6W8 199 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 V9GYY9 64 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 NOS1P29475 1434 aa1.66□□□□□ -2.14
LTN1-206ENST00000486427 LOC389332A0A1B0GUA5 103 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 GSTTP1A0A1W2PQM5 241 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 TVP23AA6NH52 213 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 K7EN84 100 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 ISLRO14498 428 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 TCAPO15273 167 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 CDS2O95674 445 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 CDK1P06493 297 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 IMPA1P29218 277 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 GPR4P46093 362 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 DEFB103AP81534 67 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 CEACAM16Q2WEN9 425 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 LGALSLQ3ZCW2 172 aaPredicted RBP1.65□□□□□ -2.15
LTN1-206ENST00000486427 ATP6AP1LQ52LC2 224 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 GAPTQ8N292 157 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 C3orf22Q8N5N4 141 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 OR8S1Q8NH09 359 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 QKIQ96PU8 341 aaKnown RBP eCLIP1.65□□□□□ -2.15
LTN1-206ENST00000486427 OR2M4Q96R27 311 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 SRRQ9GZT4 340 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 WDR55Q9H6Y2 383 aaPredicted RBP1.65□□□□□ -2.15
LTN1-206ENST00000486427 TRAPPC1Q9Y5R8 145 aa1.65□□□□□ -2.15
LTN1-206ENST00000486427 ADAMTSL3P82987 1691 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 IGHV3-43A0A0B4J1X8 118 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 RFXANKO14593 260 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 PRMT5O14744 637 aaPredicted RBP1.64□□□□□ -2.15
LTN1-206ENST00000486427 GYG2O15488 501 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 SLC37A4O43826 429 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 CD8AP01732 235 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 TRGV3P03979 118 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 RLN2P04090 185 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 ARR3P36575 388 aa1.64□□□□□ -2.15
LTN1-206ENST00000486427 WDR43Q15061 677 aaKnown RBP eCLIP1.64□□□□□ -2.15
LTN1-206ENST00000486427 LINC00596Q86U02 117 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms