RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DYRK2Q92630 601 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 PDCD1LG2Q9BQ51 273 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 HEXA-AS1Q9H8Q6 139 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 CHCHD3Q9NX63 227 aaKnown RBP10.55□□□□□ -0.72
CHMP3-208ENST00000486404 MAGEB3O15480 346 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 SULT1B1O43704 296 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 GPR137BO60478 399 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 CD2P06729 351 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 LIMS3P0CW19 117 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 LIMS4P0CW20 117 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 CCL3L1P16619 93 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 MDKP21741 143 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 DCKP27707 260 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 LGALS4P56470 323 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 IL18R1Q13478 541 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF273Q14593 569 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 GRK1Q15835 563 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 MIDNQ504T8 468 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 DHRS7BQ6IAN0 325 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF782Q6ZMW2 699 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 C17orf107Q6ZR85 190 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 OR5D14Q8NGL3 314 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 OR5R1Q8NH85 324 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 SGMS2Q8NHU3 365 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 TAF15Q92804 592 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 SNX22Q96L94 193 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 JAM3Q9BX67 310 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 BEX1Q9HBH7 125 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 EXOSC4Q9NPD3 245 aaKnown RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 MRPS18AQ9NVS2 196 aaKnown RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
CHMP3-208ENST00000486404 EXOSC1Q9Y3B2 195 aaKnown RBP10.54□□□□□ -0.72
CHMP3-208ENST00000486404 A0A1B0GUS0 222 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 hADV38S2A0JD32 116 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 POM121CA8CG34 1229 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 E9PI62 339 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 SIRPB1O00241 398 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF737O75373 536 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 MT-ND2P03891 347 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 CALCBP10092 127 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 RAB3AP20336 220 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 DUSP1P28562 367 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 NPBWR2P48146 333 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 ETV1P50549 477 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 CCDC58Q4VC31 144 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 RPL22L1Q6P5R6 122 aaKnown RBP10.53□□□□□ -0.72
CHMP3-208ENST00000486404 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 C8orf59Q8N0T1 100 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 GPER1Q99527 375 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 CHST6Q9GZX3 395 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 C1RLQ9NZP8 487 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 DIMT1Q9UNQ2 313 aaKnown RBP10.53□□□□□ -0.72
CHMP3-208ENST00000486404 GSTK1Q9Y2Q3 226 aa10.53□□□□□ -0.72
CHMP3-208ENST00000486404 MEX3AA1L020 520 aaKnown RBP10.52□□□□□ -0.73
CHMP3-208ENST00000486404 SH2D1BO14796 132 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 KDM4BO94953 1096 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 NDUFA7O95182 113 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 ZNF728P0DKX0 622 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 TMEM225BP0DP42 221 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 ZNF44P15621 663 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 CAPGP40121 348 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 SOX2P48431 317 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 BMXP51813 675 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 GTF2A1P52655 376 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-208ENST00000486404 PPP3R1P63098 170 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 CDK5R1Q15078 307 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 TAF9Q16594 264 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 OR2G6Q5TZ20 316 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 SAXO1Q8IYX7 474 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 PARP16Q8N5Y8 322 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 OR13D1Q8NGV5 346 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 GPR148Q8TDV2 347 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 TMEM80Q96HE8 168 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 ZNF649Q9BS31 505 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 RHOFQ9HBH0 211 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 HMG20AQ9NP66 347 aa10.52□□□□□ -0.73
CHMP3-208ENST00000486404 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 ANKRD65E5RJM6 399 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 H3BUX3 64 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 MGST3O14880 152 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 RBP4P02753 201 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 P2RX3P56373 397 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 ADARB1P78563 741 aaKnown RBP10.51□□□□□ -0.73
CHMP3-208ENST00000486404 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-208ENST00000486404 ZNF146Q15072 292 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 KISS1Q15726 138 aa10.51□□□□□ -0.73
CHMP3-208ENST00000486404 LRRC75BQ2VPJ9 315 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms