RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 DYSFO75923 2080 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 ANKRD20A5PA0PJZ0 165 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 M0R233 179 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 LYRM1O43325 122 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 NOS1APO75052 506 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-207ENST00000486080 NXPH2O95156 264 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 ACAA1P09110 424 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-207ENST00000486080 GNG2P59768 71 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 CCL8P80075 99 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 IKZF1Q13422 519 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 PCGF3Q3KNV8 242 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 ATAD3CQ5T2N8 411 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 LRRC29Q8WV35 223 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL9A1-207ENST00000486080 IL19Q9UHD0 177 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 CACNG2Q9Y698 323 aa12.18□□□□□ -0.46
COL9A1-207ENST00000486080 PDCD6O75340 191 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 PTTG1O95997 202 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 MT-ND4P03905 459 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 FUT3P21217 361 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 SRSF1Q07955 248 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL9A1-207ENST00000486080 ARFRP1Q13795 201 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 EFNB3Q15768 340 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 GLCCI1Q86VQ1 547 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 Q8IYB0 196 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 CELF2-AS1Q8N7Q2 184 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 HDHD3Q9BSH5 251 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-207ENST00000486080 RHOFQ9HBH0 211 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 HES4Q9HCC6 221 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 AK3Q9UIJ7 227 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 HSF4Q9ULV5 492 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
COL9A1-207ENST00000486080 TENM4Q6N022 2769 aa12.17□□□□□ -0.46
COL9A1-207ENST00000486080 UBE2QL1A1L167 161 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A18PA6NE21 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A16PA6NEW6 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A20PA6NIJ5 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A8PA6NJQ4 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A12PA8MX19 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A5PA8MXJ8 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 B9A039 149 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A15PP0C7V4 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A13PP0C7W8 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A14PP0C7W9 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAM90A24PP0C7X0 464 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 EGR1P18146 543 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 TNFSF4P23510 183 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 GATA4P43694 442 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FAAP20Q6NZ36 180 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 TGIF2LYQ8IUE0 185 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 A0A1W2PPR1 153 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 ECDO95905 644 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-207ENST00000486080 ADH4P08319 380 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 GLRA1P23415 457 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 BTCP35070 178 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 CEBPDP49716 269 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-207ENST00000486080 IL13RA2Q14627 380 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 MPV17LQ2QL34 196 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 SFRP4Q6FHJ7 346 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-207ENST00000486080 Q6P435 159 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 ACP7Q6ZNF0 438 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 Q6ZNX1 250 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 MUC15Q8N387 334 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 BOLLQ8N9W6 283 aaKnown RBP12.16□□□□□ -0.46
COL9A1-207ENST00000486080 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 FBXW5Q969U6 566 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 HRASLSQ9HDD0 168 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 DYNLRB1Q9NP97 96 aa12.16□□□□□ -0.46
COL9A1-207ENST00000486080 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-207ENST00000486080 TRAV24A0A0B4J272 114 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 FAM221AA4D161 298 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-207ENST00000486080 HSPB6O14558 160 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 HS3ST1O14792 307 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 TFF1P04155 84 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 CD3DP04234 171 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 CD55P08174 381 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 CSF1P09603 554 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 HLA-DMAP28067 261 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 ACTBP60709 375 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 ACTG1P63261 375 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
COL9A1-207ENST00000486080 DYRK1AQ13627 763 aa12.15□□□□□ -0.46
COL9A1-207ENST00000486080 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms