RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 LINC00312Q9Y6C7 94 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 PLXNB1O43157 2135 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 G3V4G9 280 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 IGHA1P01876 353 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 KIR3DL2P43630 455 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 POU3F4P49335 361 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ISL1P61371 349 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ACTA2P62736 377 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ACTG2P63267 376 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ACTC1P68032 377 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ACTA1P68133 377 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ZNF85Q03923 595 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.2
SMC4-216ENST00000485645 GRK1Q15835 563 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 TMEM244Q5VVB8 128 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 TCF23Q7RTU1 214 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 TMEM219Q86XT9 240 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 FAM58AQ8N1B3 248 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 Q8N2B8 174 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 ZNF676Q8N7Q3 588 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 TPRX1Q8N7U7 411 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 OR52N4Q8NGI2 321 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 PRSS22Q9GZN4 317 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 CHST6Q9GZX3 395 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 SERTAD4Q9NUC0 356 aa13.83□□□□□ -0.2
SMC4-216ENST00000485645 RBFOX1Q9NWB1 397 aaKnown RBP13.83□□□□□ -0.2
SMC4-216ENST00000485645 TRBV2A0A0J9YWF9 115 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 PEX14O75381 377 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 FBXO24O75426 580 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 ALPLP05186 524 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 BCL3P20749 454 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 DUSP1P28562 367 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 NPBWR2P48146 333 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 DYNLT3P51808 116 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 MTCP1P56278 107 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 ZNF91Q05481 1191 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 BEAN1Q3B7T3 259 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 LYG1Q8N1E2 194 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 ADAT3Q96EY9 351 aaPredicted RBP13.82□□□□□ -0.2
SMC4-216ENST00000485645 S100A14Q9HCY8 104 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 IL36RNQ9UBH0 155 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 GLS2Q9UI32 602 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 HILPDAQ9Y5L2 63 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 SESN1Q9Y6P5 492 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
SMC4-216ENST00000485645 IGHV2-26A0A0B4J1V2 119 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 IGKV1-9A0A0C4DH69 117 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 F2RL2O00254 374 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 MGST3O14880 152 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 PSPNO60542 156 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 ZNF20P17024 532 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 PRKACAP17612 351 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 ATF1P18846 271 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 PRKACBP22694 351 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 EMX1Q04741 257 aaPredicted RBP13.81□□□□□ -0.2
SMC4-216ENST00000485645 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 ZNF146Q15072 292 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 NSUN5P1Q3KNT7 163 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 ARSJQ5FYB0 599 aaPredicted RBP13.81□□□□□ -0.2
SMC4-216ENST00000485645 SPIN3Q5JUX0 258 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 ZBTB49Q6ZSB9 765 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 LHFPL2Q6ZUX7 228 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 UTS2BQ765I0 119 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 KCTD20Q7Z5Y7 419 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 OR2G2Q8NGZ5 317 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 NDNFQ8TB73 568 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 TRUB1Q8WWH5 349 aaKnown RBP13.81□□□□□ -0.2
SMC4-216ENST00000485645 FGGYQ96C11 551 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 IMPAD1Q9NX62 359 aa13.81□□□□□ -0.2
SMC4-216ENST00000485645 H3BUI4 141 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 EI24O14681 340 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 ENTPD6O75354 484 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 ISG15P05161 165 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 OCM2P0CE71 109 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
SMC4-216ENST00000485645 CALCBP10092 127 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 CD28P10747 220 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
SMC4-216ENST00000485645 ERP29P30040 261 aaKnown RBP13.8□□□□□ -0.2
SMC4-216ENST00000485645 SNU13P55769 128 aaKnown RBP13.8□□□□□ -0.2
SMC4-216ENST00000485645 TRAPPC6BQ86SZ2 158 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 OR4S1Q8NGB4 309 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 RNF166Q96A37 237 aaPredicted RBP13.8□□□□□ -0.2
SMC4-216ENST00000485645 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 FRRS1LQ9P0K9 344 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 ORC6Q9Y5N6 252 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
SMC4-216ENST00000485645 DAPL1A0PJW8 107 aa13.79□□□□□ -0.2
SMC4-216ENST00000485645 SH2D1BO14796 132 aa13.79□□□□□ -0.2
SMC4-216ENST00000485645 HTR1AP08908 422 aa13.79□□□□□ -0.2
SMC4-216ENST00000485645 JUNBP17275 347 aaPredicted RBP13.79□□□□□ -0.2
SMC4-216ENST00000485645 ALDH3A2P51648 485 aa13.79□□□□□ -0.2
SMC4-216ENST00000485645 PDZK1IP1Q13113 114 aa13.79□□□□□ -0.2
SMC4-216ENST00000485645 KPRPQ5T749 579 aaPredicted RBP13.79□□□□□ -0.2
SMC4-216ENST00000485645 NDUFA11Q86Y39 141 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms