RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 PRKACAP17612 351 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 ATP1B3P54709 279 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 ZNF91Q05481 1191 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 TMED1Q13445 227 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 C11orf88Q6PI97 169 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 OR11H6Q8NGC7 330 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 PP6455Q8WZ26 134 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 CFHR4Q92496 578 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 FGGYQ96C11 551 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 RNFT2Q96EX2 444 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 hADV38S2A0JD32 116 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 PSPNO60542 156 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 ZNF20P17024 532 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 AZGP1P25311 298 aaKnown RBP17.39■□□□□ 0.37
USP40-215ENST00000484528 MTCP1P56278 107 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 NANOS3P60323 173 aaKnown RBP17.39■□□□□ 0.37
USP40-215ENST00000484528 ACTA2P62736 377 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 ACTG2P63267 376 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 ACTC1P68032 377 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 ACTA1P68133 377 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 MEF2CQ06413 473 aaPredicted RBP17.39■□□□□ 0.37
USP40-215ENST00000484528 FAM58AQ8N1B3 248 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 ZNF676Q8N7Q3 588 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 OR4S1Q8NGB4 309 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 OR10AC1Q8NH08 325 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 RPS4Y2Q8TD47 263 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 MALSU1Q96EH3 234 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 AASSQ9UDR5 926 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 HILPDAQ9Y5L2 63 aa17.39■□□□□ 0.37
USP40-215ENST00000484528 TRBV2A0A0J9YWF9 115 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 DAPL1A0PJW8 107 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 A6NDX4 124 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 G3V4G9 280 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 SIRPB1O00241 398 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 CYB5AP00167 134 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 ATF1P18846 271 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 PEX2P28328 305 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 OR12D2P58182 307 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 ZIK1Q3SY52 487 aaPredicted RBP17.38■□□□□ 0.37
USP40-215ENST00000484528 TMEM244Q5VVB8 128 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 RNF144BQ7Z419 303 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 TRAPPC6BQ86SZ2 158 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 Q8IYB0 196 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 DNAAF1Q8NEP3 725 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 C10orf35Q96D05 121 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 SPACA5Q96QH8 159 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 SERTAD4Q9NUC0 356 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 FRRS1LQ9P0K9 344 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 LINC00312Q9Y6C7 94 aa17.38■□□□□ 0.37
USP40-215ENST00000484528 EI24O14681 340 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 OR3A1P47881 315 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 NSUN5P1Q3KNT7 163 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 ENTHD1Q8IYW4 607 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 OR51A4Q8NGJ6 313 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 OR5D18Q8NGL1 313 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 NDNFQ8TB73 568 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 OPALINQ96PE5 141 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 OR5M11Q96RB7 305 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 SESN1Q9Y6P5 492 aa17.37■□□□□ 0.37
USP40-215ENST00000484528 IGHV2-26A0A0B4J1V2 119 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 F2RL2O00254 374 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 SLC16A6O15403 523 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 FBXO24O75426 580 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 MMP23AO75900 390 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 ALPLP05186 524 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 HTR1AP08908 422 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 OCM2P0CE71 109 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 OCMP0CE72 109 aaPredicted RBP17.36■□□□□ 0.37
USP40-215ENST00000484528 CD28P10747 220 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 PRKACBP22694 351 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 SLC34A1Q06495 639 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 BAIAP2L2Q6UXY1 529 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 LHFPL2Q6ZUX7 228 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 UTS2BQ765I0 119 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 OR13C9Q8NGT0 318 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 CDCA4Q9BXL8 241 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 GSTK1Q9Y2Q3 226 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 ORC6Q9Y5N6 252 aa17.36■□□□□ 0.37
USP40-215ENST00000484528 IGKV1-12A0A0C4DH73 117 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 J3QLW9 94 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 J3QRE1 110 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 MGST3O14880 152 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 IGKV1D-12P01611 117 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 OPN1MWP04001 364 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 OPN1MW2P0DN77 364 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 OPN1MW3P0DN78 364 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 ZNF19P17023 458 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 PDZK1IP1Q13113 114 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 ZNF146Q15072 292 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 TMEM95Q3KNT9 176 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 ARSJQ5FYB0 599 aaPredicted RBP17.35■□□□□ 0.37
USP40-215ENST00000484528 PRAMEF5Q5TYX0 476 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 Q6ZS46 218 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 OR13C3Q8NGS6 347 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 TRUB1Q8WWH5 349 aaKnown RBP17.35■□□□□ 0.37
USP40-215ENST00000484528 HRASLS5Q96KN8 279 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 MBOAT4Q96T53 435 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 CLEC7AQ9BXN2 247 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 TMEM133Q9H2Q1 129 aa17.35■□□□□ 0.37
USP40-215ENST00000484528 PITPNC1Q9UKF7 332 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms