RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ICAM4Q14773 271 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 KHDC3LQ587J8 217 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 CPEB2Q7Z5Q1 589 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 HIST3H2BBQ8N257 126 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 DEFB119Q8N690 84 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 SLC35G3Q8N808 338 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 RLN3Q8WXF3 142 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 TP53RKQ96S44 253 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 SDHAF3Q9NRP4 125 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 A0A087WWC5 75 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 A0A1B0GV90 55 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 A0A1W2PPC4 97 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 BCAT2O15382 392 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 PHF1O43189 567 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF41P51814 821 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 LGI3Q8N145 548 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 OR2C3Q8N628 320 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF784Q8NCA9 323 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 PP6455Q8WZ26 134 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 KLRF1Q9NZS2 232 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 TMED3Q9Y3Q3 217 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 A0A0U1RQV5 110 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 SEC14L6B5MCN3 397 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 RPL36A-HNRNPH2H7BZ11 118 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 ONECUT2O95948 504 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 MTCP1P56278 107 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 PRSS12P56730 875 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 OR1D5P58170 312 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 GAMTQ14353 236 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 MEX3BQ6ZN04 569 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 SUMF1Q8NBK3 374 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 MRGPRX4Q96LA9 322 aa17.16■□□□□ 0.34
RPUSD3-216ENST00000484134 IGKV1-27A0A075B6S5 117 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 NKX2-6A6NCS4 301 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 EPOPA6NHQ4 379 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 CYB5BO43169 146 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 SFTPDP35247 375 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 PHYHD1Q5SRE7 291 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 GTF3AQ92664 365 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF700Q9H0M5 742 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 MMP17Q9ULZ9 603 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF726A6NNF4 738 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 F10P00742 488 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 ARL4DP49703 201 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 GNMTQ14749 295 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 SLC22A25Q6T423 547 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 Q6ZPA2 131 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 ABHD5Q8WTS1 349 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 OXGR1Q96P68 337 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 WDR87Q6ZQQ6 2873 aa17.15■□□□□ 0.34
RPUSD3-216ENST00000484134 SCAF4O95104 1147 aaKnown RBP17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 EPHA1P21709 976 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 PTGDSP41222 190 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 ENDOGQ14249 297 aaKnown RBP17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 SLC25A53Q5H9E4 307 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 C17orf82Q86X59 251 aaPredicted RBP17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 ADPRHL1Q8NDY3 354 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 PLPP5Q8NEB5 264 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 NFAM1Q8NET5 270 aaPredicted RBP17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 ANGPTL4Q9BY76 406 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 GFOD1Q9NXC2 390 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 KIAA1456Q9P272 454 aa17.14■□□□□ 0.34
RPUSD3-216ENST00000484134 PROB1E7EW31 1015 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 RGS19P49795 217 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 SNAI3Q3KNW1 292 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 DBX2Q6ZNG2 339 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 ODF3L1Q8IXM7 274 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 DMRTC2Q8IXT2 367 aaPredicted RBP17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 CCDC54Q8NEL0 328 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 BCO1Q9HAY6 547 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 GLRX2Q9NS18 164 aa17.14■□□□□ 0.33
RPUSD3-216ENST00000484134 A0A1B0GX78 115 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 DTYMKP23919 212 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 GLIPR1P48060 266 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 CLDN17P56750 224 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 SSTP61278 116 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 OR14L1PQ8NHC6 308 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 S100PBPQ96BU1 408 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 MEGF10Q96KG7 1140 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 MAGT1Q9H0U3 335 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 UFSP2Q9NUQ7 469 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 FAM230AA0A1W2PPH8 454 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF587BE7ETH6 402 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 PPP1R2P9O14990 202 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 SELLP14151 372 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 RUNX1Q01196 453 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 PDCD1Q15116 288 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 RSU1Q15404 277 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 PIGYQ3MUY2 71 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 RNF138Q8WVD3 245 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 FRZBQ92765 325 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 TVP23CQ96ET8 276 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 METTL9Q9H1A3 318 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 UNKLQ9H9P5 680 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 WSB1Q9Y6I7 421 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 SDK1Q7Z5N4 2213 aa17.13■□□□□ 0.33
RPUSD3-216ENST00000484134 GEMIN2O14893 280 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 RBP2P50120 134 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms