RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RBM11P57052 281 aaKnown RBP11.82□□□□□ -0.52
SMAD9-204ENST00000483941 TAS2R20P59543 309 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 PNLIPRP3Q17RR3 467 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 TRIQKQ629K1 86 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 Q6ZTK2 550 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 RNF144BQ7Z419 303 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 Q8N402 240 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 OR10K1Q8NGX5 313 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 Q8TCH9 128 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 FCAMRQ8WWV6 532 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
SMAD9-204ENST00000483941 NKX3-1Q99801 234 aaPredicted RBP11.82□□□□□ -0.52
SMAD9-204ENST00000483941 NRIP2Q9BQI9 281 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 SRRQ9GZT4 340 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 SAP30LQ9HAJ7 183 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 C1orf123Q9NWV4 160 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 PLEKHA6Q9Y2H5 1048 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 ISPDA4D126 451 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 SERPINE3A8MV23 424 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 GABARAPH6UMI1 98 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 RAB27BO00194 218 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 GSTZ1O43708 216 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-204ENST00000483941 SYNGR1O43759 233 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 SFTPBP07988 381 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 GSTT2BP0CG30 244 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-204ENST00000483941 PRSS3P35030 304 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 PMELP40967 661 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 DEFA1P59665 94 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 DEFA3P59666 94 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 AP3S2P59780 193 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 MRPS15P82914 257 aaKnown RBP11.81□□□□□ -0.52
SMAD9-204ENST00000483941 SSBP1Q04837 148 aaKnown RBP11.81□□□□□ -0.52
SMAD9-204ENST00000483941 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 WDR82Q6UXN9 313 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 C20orf204Q6ZNR8 217 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 WDR86Q86TI4 376 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 BIVMQ86UB2 503 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 OR8H2Q8N162 312 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 C19orf18Q8NEA5 215 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 NEUROG1Q92886 237 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 PLEKHJ1Q9NW61 149 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 TAS2R8Q9NYW2 309 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 PPP1R3CQ9UQK1 317 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 PLCE1Q9P212 2302 aa11.81□□□□□ -0.52
SMAD9-204ENST00000483941 A0A0G2JMP0 313 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 A0A0X1KG70 313 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 SH2D1BO14796 132 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 CA11O75493 328 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 PRKACAP17612 351 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 FUT3P21217 361 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 GLRA1P23415 457 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 DNASE1P24855 282 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 CBX5P45973 191 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 NPBWR2P48146 333 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 PTH2RP49190 550 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 ERVK11-1P61568 191 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 SCN1BQ07699 218 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 RBM39Q14498 530 aaKnown RBP11.8□□□□□ -0.52
SMAD9-204ENST00000483941 PRAMEF6Q5VXH4 476 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 DTX2Q86UW9 622 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 C11orf53Q8IXP5 236 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 OR4M2Q8NGB6 313 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-204ENST00000483941 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 ABHD1Q96SE0 405 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 KCNK15Q9H427 330 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 SEBOXQ9HB31 216 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-204ENST00000483941 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMAD9-204ENST00000483941 UFSP2Q9NUQ7 469 aa11.8□□□□□ -0.52
SMAD9-204ENST00000483941 A0A1W2PP11 408 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 POM121CA8CG34 1229 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 PDCD6O75340 191 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 RHBDL1O75783 438 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 UPK1BO75841 260 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 RBBP9O75884 186 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 OR7C1O76099 320 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 ECDO95905 644 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 KNG1P01042 644 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 HLA-DQB1P01920 261 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 MELTFP08582 738 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 GABRR1P24046 479 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 GNG2P59768 71 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 ZNF146Q15072 292 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 MPPED2Q15777 294 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 KCNJ8Q15842 424 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 ZNF79Q15937 498 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 TAF9Q16594 264 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms