RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 FAM90A24PP0C7X0 464 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 PLA2G2AP14555 144 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 PRKACAP17612 351 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 DUSP1P28562 367 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 SERPINF1P36955 418 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 INPP1P49441 399 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 SSBP1Q04837 148 aaKnown RBP8.53□□□□□ -1.04
HDAC6-226ENST00000483656 DYRK1AQ13627 763 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 NKAPLQ5M9Q1 402 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 Q6P435 159 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 BRICD5Q6PL45 260 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 CCBE1Q6UXH8 406 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-226ENST00000483656 TRAPPC6BQ86SZ2 158 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 GLCCI1Q86VQ1 547 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 ITLN1Q8WWA0 313 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 EMG1Q92979 244 aaKnown RBP8.53□□□□□ -1.04
HDAC6-226ENST00000483656 PIK3IP1Q96FE7 263 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 OR2V2Q96R30 315 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 SULT4A1Q9BR01 284 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 FAAP24Q9BTP7 215 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 RHOFQ9HBH0 211 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 HRASLSQ9HDD0 168 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 C1orf123Q9NWV4 160 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 RCC2Q9P258 522 aaKnown RBP8.53□□□□□ -1.04
HDAC6-226ENST00000483656 POLDIP2Q9Y2S7 368 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 ROS1P08922 2347 aa8.53□□□□□ -1.04
HDAC6-226ENST00000483656 ICE1Q9Y2F5 2266 aa8.52□□□□□ -1.04
HDAC6-226ENST00000483656 A6NLC8 198 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 C17orf100A8MU93 164 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 PRSS44E7EML9 344 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 PDCD6O75340 191 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 ECDO95905 644 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 MT-ND4P03905 459 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 CD55P08174 381 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 GSTT2BP0CG30 244 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 EGR1P18146 543 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 NAT1P18440 290 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 FUT3P21217 361 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 APOBEC3AP31941 199 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 CFHR2P36980 270 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 GATA4P43694 442 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 GNG2P59768 71 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 SRSF1Q07955 248 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 MZT1Q08AG7 82 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 IL13RA2Q14627 380 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 EFNB3Q15768 340 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 MPV17LQ2QL34 196 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 PCGF3Q3KNV8 242 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 PLA1AQ53H76 456 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 MOGAT3Q86VF5 341 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 Q8IYB0 196 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 CELF2-AS1Q8N7Q2 184 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 TMEM229BQ8NBD8 167 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 DUSP18Q8NEJ0 188 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 DYRK2Q92630 601 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 FBXW5Q969U6 566 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 COX4I2Q96KJ9 171 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 HDHD3Q9BSH5 251 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 WDR13Q9H1Z4 485 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 PLEKHJ1Q9NW61 149 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 CISD1Q9NZ45 108 aaKnown RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 AK3Q9UIJ7 227 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 ZDHHC8Q9ULC8 765 aa8.52□□□□□ -1.05
HDAC6-226ENST00000483656 SPTBN1Q01082 2364 aaKnown RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 UBR5O95071 2799 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-226ENST00000483656 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-226ENST00000483656 TRAV24A0A0B4J272 114 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 A0A1W2PPR1 153 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 SERPINE3A8MV23 424 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 VSTM5A8MXK1 200 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-226ENST00000483656 J3QKU1 62 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 OR7C1O76099 320 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-226ENST00000483656 NXPH2O95156 264 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 CD74P04233 296 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 CD3DP04234 171 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 CSF1P09603 554 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 SLC6A1P30531 599 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 RCVRNP35243 200 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 GMFBP60983 142 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 TNFAIP6P98066 277 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-226ENST00000483656 IKZF1Q13422 519 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 ARFRP1Q13795 201 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 ARL6IP1Q15041 203 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 ZNF146Q15072 292 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 SFRP4Q6FHJ7 346 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-226ENST00000483656 FAAP20Q6NZ36 180 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 ACP7Q6ZNF0 438 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 Q6ZPA2 131 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 LINC00596Q86U02 117 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 GCSAMQ8N6F7 178 aa8.51□□□□□ -1.05
HDAC6-226ENST00000483656 OR4S1Q8NGB4 309 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms