RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 C6orf201Q7Z4U5 140 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 DYRK2Q92630 601 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 PIK3IP1Q96FE7 263 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 CADP27708 2225 aa12.46□□□□□ -0.41
CHD3-211ENST00000481999 ZNF850A8MQ14 1090 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 F8VVB4 439 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 F8VWA3 439 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 NRASP01111 189 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 TPT1P13693 172 aaKnown RBP12.46□□□□□ -0.42
CHD3-211ENST00000481999 UQCC3Q6UW78 93 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 LHFPL1Q86WI0 220 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 CALHM1Q8IU99 346 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 CNEP1R1Q8N9A8 125 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 CCDC54Q8NEL0 328 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 OR56B2PQ8NGI1 322 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 STARD10Q9Y365 291 aa12.46□□□□□ -0.42
CHD3-211ENST00000481999 FOXI3A8MTJ6 420 aaPredicted RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 SERPINE3A8MV23 424 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 TRIM77I1YAP6 450 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 CDK2AP1O14519 115 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 BLVRBP30043 206 aaPredicted RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 SNU13P55769 128 aaKnown RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 NAAAQ02083 359 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 FOXF2Q12947 444 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 TAF9Q16594 264 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 PIGYQ3MUY2 71 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 NKAPLQ5M9Q1 402 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 VWA1Q6PCB0 445 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 Q6ZSR3 168 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 OR13G1Q8NGZ3 307 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 S100A13Q99584 98 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 ST6GALNAC5Q9BVH7 336 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 FGF23Q9GZV9 251 aaPredicted RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 CHD8Q9HCK8 2581 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 ZNF205O95201 554 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 SFTPBP07988 381 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 RBMXP38159 391 aaKnown RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 FOXC1Q12948 553 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 SLC9A3R2Q15599 337 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 PLCXD3Q63HM9 321 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 UNQ6126/PRO20091Q6UXV3 157 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 CSNK2A3Q8NEV1 391 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 BPIFCQ8NFQ6 507 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 C10orf35Q96D05 121 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 RTBDNQ9BSG5 229 aaPredicted RBP12.45□□□□□ -0.42
CHD3-211ENST00000481999 C1QTNF5Q9BXJ0 243 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 OSGIN2Q9Y236 505 aa12.45□□□□□ -0.42
CHD3-211ENST00000481999 IGHV3-64DA0A0J9YX35 117 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 MSTNO14793 375 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 HTR3BO95264 441 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 WNT5AP41221 380 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PPA1Q15181 289 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 SURF2Q15527 256 aaPredicted RBP12.44□□□□□ -0.42
CHD3-211ENST00000481999 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 NSUN5P2Q63ZY6 315 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 RTL6Q6ICC9 239 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PECRQ9BY49 303 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PCDHB10Q9UN67 800 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 IGKV1D-8A0A087WSZ0 117 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 TRAV17A0A0B4J275 112 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 RAB19A4D1S5 217 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 CA11O75493 328 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PI3P19957 117 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 CPT2P23786 658 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
CHD3-211ENST00000481999 RTP5Q14D33 572 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PLEKHN1Q494U1 663 aaPredicted RBP12.44□□□□□ -0.42
CHD3-211ENST00000481999 IGF2-ASQ6U949 168 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 MDP1Q86V88 176 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 C9orf106Q8NAJ2 232 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 SLC30A7Q8NEW0 376 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PAPOLGQ9BWT3 736 aaKnown RBP12.44□□□□□ -0.42
CHD3-211ENST00000481999 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
CHD3-211ENST00000481999 PTPRQQ9UMZ3 2332 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 FAM221AA4D161 298 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
CHD3-211ENST00000481999 FGF16O43320 207 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 ADAP1O75689 374 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 DEFA5Q01523 94 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 OR8B8Q15620 311 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 CHRFAM7AQ494W8 412 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 PRSS54Q6PEW0 395 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 COLCA1Q6ZS62 124 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 LRRC46Q96FV0 321 aa12.43□□□□□ -0.42
CHD3-211ENST00000481999 NARS2Q96I59 477 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms