RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 A0A1B0GVG6 124 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 CD300LFQ8TDQ1 290 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 ZNF665Q9H7R5 613 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 UNKLQ9H9P5 680 aaKnown RBP16.74■□□□□ 0.27
CCM2-214ENST00000481194 PPIHO43447 177 aaKnown RBP16.74■□□□□ 0.27
CCM2-214ENST00000481194 AADACP22760 399 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 MOGAT3Q86VF5 341 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 SCN8AQ9UQD0 1980 aa16.74■□□□□ 0.27
CCM2-214ENST00000481194 OOEPA6NGQ2 149 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 NKX2-1P43699 371 aaPredicted RBP16.73■□□□□ 0.27
CCM2-214ENST00000481194 OR8G5Q8NG78 346 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 OR10AD1Q8NGE0 317 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 S100PBPQ96BU1 408 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 CDRT15L2A8MXV6 281 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 TRDCB7Z8K6 153 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 NKX2-5P52952 324 aaPredicted RBP16.73■□□□□ 0.27
CCM2-214ENST00000481194 ZNF266Q14584 549 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 PRAMEF5Q5TYX0 476 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 PRAMEF6Q5VXH4 476 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 GLDNQ6ZMI3 551 aaPredicted RBP16.73■□□□□ 0.27
CCM2-214ENST00000481194 TINAGL1Q9GZM7 467 aaPredicted RBP16.73■□□□□ 0.27
CCM2-214ENST00000481194 GFOD1Q9NXC2 390 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 SUB1P53999 127 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCM2-214ENST00000481194 MRGPRGQ86SM5 289 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 SEC22AQ96IW7 307 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 CDIPTO14735 213 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 DFFBO76075 338 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 FAM87AP0C7U9 286 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 FAAP20Q6NZ36 180 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 FAHD2BQ6P2I3 314 aaPredicted RBP16.73■□□□□ 0.27
CCM2-214ENST00000481194 FAHD2AQ96GK7 314 aa16.73■□□□□ 0.27
CCM2-214ENST00000481194 PINLYPA6NC86 204 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 LY86O95711 162 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 CLDN1O95832 211 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 ZNF616Q08AN1 781 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 BCL2L2Q92843 193 aaPredicted RBP16.72■□□□□ 0.27
CCM2-214ENST00000481194 YIPF5Q969M3 257 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 MESP1Q9BRJ9 268 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 AMMECR1Q9Y4X0 333 aaPredicted RBP16.72■□□□□ 0.27
CCM2-214ENST00000481194 CCDC88CQ9P219 2028 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 SPDEFO95238 335 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 MST1P26927 711 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 LRRTM1Q86UE6 522 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 OR4S1Q8NGB4 309 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 KIAA1456Q9P272 454 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 C1QBP02746 253 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 IFNA4P05014 189 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 RBM11P57052 281 aaKnown RBP16.72■□□□□ 0.27
CCM2-214ENST00000481194 SYNGR3O43761 229 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 OR8B3Q8NGG8 313 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 OR8B2Q96RD0 313 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 ABHD1Q96SE0 405 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 FAM234AQ9H0X4 552 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 RPL36A-HNRNPH2H7BZ11 118 aa16.72■□□□□ 0.27
CCM2-214ENST00000481194 ZNF808Q8N4W9 903 aaPredicted RBP16.72■□□□□ 0.27
CCM2-214ENST00000481194 BTBD17A6NE02 478 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 OR52W1Q6IF63 320 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 CADM3Q8N126 398 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 C2orf50Q96LR7 162 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 CIB3Q96Q77 187 aaPredicted RBP16.71■□□□□ 0.27
CCM2-214ENST00000481194 IGF2-ASQ6U949 168 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 ZNF716A6NP11 495 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 OR1S2Q8NGQ3 325 aa16.71■□□□□ 0.27
CCM2-214ENST00000481194 TAAR5O14804 337 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 GEMIN2O14893 280 aaKnown RBP16.71■□□□□ 0.26
CCM2-214ENST00000481194 AKR7A2O43488 359 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 FGF12P61328 243 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 TESK1Q15569 626 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 TMEM268Q5VZI3 342 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 MUC20Q8N307 709 aaPredicted RBP16.71■□□□□ 0.26
CCM2-214ENST00000481194 OR10V1Q8NGI7 309 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 RASL12Q9NYN1 266 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 ANXA10Q9UJ72 324 aa16.71■□□□□ 0.26
CCM2-214ENST00000481194 M0R036 132 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 GZMHP20718 246 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 C19orf48Q6RUI8 117 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 OR13C8Q8NGS7 320 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 SCN2AQ99250 2005 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 IFNA10P01566 189 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 SERPINF1P36955 418 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 GFRA1P56159 465 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 DBPQ10586 325 aaPredicted RBP16.7■□□□□ 0.26
CCM2-214ENST00000481194 TSPAN15O95858 294 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 RHEBQ15382 184 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 SNAI3Q3KNW1 292 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 SOCS1O15524 211 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 HES1Q14469 280 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 OPCMLQ14982 345 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 TSC22D1Q15714 1073 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 GGNQ86UU5 652 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 ERGIC1Q969X5 290 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 ZNF629Q9UEG4 869 aaPredicted RBP16.7■□□□□ 0.26
CCM2-214ENST00000481194 AK3Q9UIJ7 227 aa16.7■□□□□ 0.26
CCM2-214ENST00000481194 ADAM20O43506 726 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 CST4P01036 141 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 CEACAM6P40199 344 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 UBTD1Q9HAC8 227 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 HEYLQ9NQ87 328 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms