RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ZBED5Q49AG3 693 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM255AQ5JRV8 349 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CYB5R2Q6BCY4 276 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CLEC6AQ6EIG7 209 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CAMK2N1Q7Z7J9 78 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 ARIH2OSQ8N7S6 290 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NT5CQ8TCD5 201 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 AGR3Q8TD06 166 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 GEMIN6Q8WXD5 167 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TSLPQ969D9 159 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 SLC38A4Q969I6 547 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 C8orf44Q96CB5 159 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TLCD1Q96CP7 247 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 MS4A6EQ96DS6 147 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 ASB9Q96DX5 294 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 L3HYPDHQ96EM0 354 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 WDR34Q96EX3 536 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 CYYR1Q96J86 154 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 HDHD3Q9BSH5 251 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 EFCAB11Q9BUY7 163 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 OSBPL10Q9BXB5 764 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 MS4A8Q9BY19 250 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 DRC3Q9H069 523 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 IQCGQ9H095 443 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 OR51B5Q9H339 312 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 RPF2Q9H7B2 306 aaKnown RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF160Q9HCG1 818 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 FIS1Q9Y3D6 152 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 TIMM22Q9Y584 194 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 PIEZO2Q9H5I5 2752 aa3.35□□□□□ -1.87
UPF3A-207ENST00000481131 NUP214P35658 2090 aaPredicted RBP3.35□□□□□ -1.87
UPF3A-207ENST00000481131 A0A075B6Q4 140 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM120BA0PK00 339 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 ARGFXA6NJG6 315 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 C9J4A7 227 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 H3BNH8 94 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 MANBAO00462 879 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 PLPP1O14494 284 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 DYNC1I1O14576 645 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 CHST10O43529 356 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 CD5LO43866 347 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SS18L1O75177 396 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 NSA2O95478 260 aaKnown RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 BGLAPP02818 100 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 BPGMP07738 259 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SERPINA6P08185 405 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SMIM10L1P0DMW3 83 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 MGMTP16455 207 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF24P17028 368 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 BGNP21810 368 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 HMOX2P30519 316 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SSR2P43308 183 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 DNAJB13P59910 316 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 BTN3A2P78410 334 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 BTG2P78543 158 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 HMGCS1Q01581 520 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 RELAQ04206 551 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM183BQ1AE95 376 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 DEFB109BQ30KR1 87 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 CCDC153Q494R4 210 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SOHLH1Q5JUK2 328 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 KHDRBS2Q5VWX1 349 aaKnown RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 TTC19Q6DKK2 380 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 MED27Q6P2C8 311 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 LYPD2Q6UXB3 125 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM183AQ8IXX5 376 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 CA13Q8N1Q1 262 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 STPG2Q8N412 459 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 LIX1Q8N485 282 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 TBC1D19Q8N5T2 526 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 MDS2Q8NDY4 140 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 CCDC54Q8NEL0 328 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 OR2Y1Q8NGV0 311 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 OR10R2Q8NGX6 335 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 OR51Q1Q8NH59 317 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SLC7A13Q8TCU3 470 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 DOK4Q8TEW6 326 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 KIAA1143Q96AT1 154 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SMIM10Q96HG1 83 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF382Q96SR6 550 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 PAIP2Q9BPZ3 127 aaKnown RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF717Q9BY31 904 aaPredicted RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 C20orf27Q9GZN8 174 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 PRORYQ9H606 182 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 ANKHQ9HCJ1 492 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 FARSAQ9Y285 508 aaKnown RBP3.34□□□□□ -1.87
UPF3A-207ENST00000481131 SLC22A7Q9Y694 548 aa3.34□□□□□ -1.87
UPF3A-207ENST00000481131 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
UPF3A-207ENST00000481131 CHD6Q8TD26 2715 aa3.34□□□□□ -1.88
UPF3A-207ENST00000481131 IGLV3-12A0A075B6K2 115 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 A0A0A6YYD5 115 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 TRBV11-1A0A0K0K1C0 115 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 SMCO3A2RU48 225 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 GOLGA6L10A6NI86 522 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 C21orf140B9A014 251 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 H0YIV9 168 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms