RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF182P17025 639 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-218ENST00000479554 DLX1P56177 255 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 CAV3P56539 151 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 TAS2R43P59537 309 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 PRB3Q04118 309 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-218ENST00000479554 KLRD1Q13241 179 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 DMRTC1Q5HYR2 192 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 HAGHLQ6PII5 290 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-218ENST00000479554 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 SYS1Q8N2H4 156 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 TMEM185AQ8NFB2 350 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 AQP3Q92482 292 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 CHCHD6Q9BRQ6 235 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 ISG20L2Q9H9L3 353 aaKnown RBP11.76□□□□□ -0.53
ATG4B-218ENST00000479554 ELL3Q9HB65 397 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-218ENST00000479554 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 SSR3Q9UNL2 185 aa11.76□□□□□ -0.53
ATG4B-218ENST00000479554 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 LOC110117498-PIK3R3F6TDL0 507 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 J3QLW9 94 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 M0R1W7 72 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 GPX5O75715 221 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 PAHP00439 452 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 LALBAP00709 142 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 PSG2P11465 335 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF19P17023 458 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 GABRA5P31644 462 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF684Q5T5D7 378 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 BCL2L15Q5TBC7 163 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 NCR3LG1Q68D85 454 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 NDNFQ8TB73 568 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 DCSTAMPQ9H295 470 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
ATG4B-218ENST00000479554 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF222Q9UK12 451 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 RNF114Q9Y508 228 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 R4GMQ9 66 aa11.75□□□□□ -0.53
ATG4B-218ENST00000479554 TRBV23-1A0A0A0MS06 115 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 MEIOCA2RUB1 952 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 NRASP01111 189 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 TTRP02766 147 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 SERPINB10P48595 397 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 UBE2E1P51965 193 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 CAPZA1P52907 286 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 GBX2P52951 348 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-218ENST00000479554 OR12D2P58182 307 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 TAF9Q16594 264 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 SMIM21Q3B7S5 101 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 CLVS2Q5SYC1 327 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 DHRS7BQ6IAN0 325 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-218ENST00000479554 PLEKHG7Q6ZR37 379 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 C1orf122Q6ZSJ8 110 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 SSX6Q7RTT6 188 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 KCTD20Q7Z5Y7 419 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 FAM185AQ8N0U4 392 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 PNKDQ8N490 385 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 POC1AQ8NBT0 407 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 DYNC2LI1Q8TCX1 351 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 HAVCR2Q8TDQ0 301 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 CENPOQ9BU64 300 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 RASL12Q9NYN1 266 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 VPREB3Q9UKI3 123 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 OR52A1Q9UKL2 312 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
ATG4B-218ENST00000479554 MAB21L2Q9Y586 359 aa11.74□□□□□ -0.53
ATG4B-218ENST00000479554 VWFP04275 2813 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 TRDV1A0A1B0GX56 115 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 J3QT63 122 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 MAGEB4O15481 346 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-218ENST00000479554 SRSF10O75494 262 aaKnown RBP11.73□□□□□ -0.53
ATG4B-218ENST00000479554 CELP19835 753 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 GALP22466 123 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 SAA4P35542 130 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 HAAOP46952 286 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 RPS25P62851 125 aaKnown RBP11.73□□□□□ -0.53
ATG4B-218ENST00000479554 EGR3Q06889 387 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
ATG4B-218ENST00000479554 TRAM1Q15629 374 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 ACP7Q6ZNF0 438 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF573Q86YE8 665 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 ZFP41Q8N8Y5 198 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 CITED1Q99966 193 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 GPR173Q9NS66 373 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 V9GYS6 101 aa11.73□□□□□ -0.53
ATG4B-218ENST00000479554 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
ATG4B-218ENST00000479554 RFPL4AA6NLU0 287 aa11.72□□□□□ -0.53
ATG4B-218ENST00000479554 RFPL4AL1F8VTS6 287 aa11.72□□□□□ -0.53
ATG4B-218ENST00000479554 SYNGR1O43759 233 aa11.72□□□□□ -0.53
ATG4B-218ENST00000479554 CLPXO76031 633 aa11.72□□□□□ -0.53
ATG4B-218ENST00000479554 PGA5P0DJD9 388 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms